Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005179 18 1135 XP_005245088 17 3301 NP_056018 17 3301 NP_056324 17 4312 NP_078966 16 5631 NP_060834 16 5631 NP_149016 16 7355 XP_005265460 16 7355 NP_085128 15 9605 NP_775099 15 9605 NP_001019554 15 9605 NP_056472 15 9605 NP_004230 15 9605 NP_055718 15 9605 NP_005952 15 9605 XP_005276320 15 9605 XP_005276319 15 9605 XP_005276318 15 9605 XP_005276317 15 9605 XP_006725067 15 9605 XP_006725066 15 9605 XP_006725065 15 9605 XP_006725064 15 9605 XP_005255623 15 9605 XP_005268272 15 9605 XP_005268270 15 9605 XP_006720384 15 9605 XP_006719740 15 9605 XP_006719739 15 9605 XP_006719738 15 9605 XP_005269272 15 9605 XP_005248451 15 9605 XP_005248450 15 9605 XP_005248449 15 9605 XP_005248448 15 9605 XP_006710226 15 9605 NP_076936 15 9605>NP_005179 Length = 906 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DISTASSSF 9 DIS ASSSF Sbjct: 792 DISNASSSF 800>XP_005245088 Length = 1435 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DISTASSSF 9 D+ST+ SSF Sbjct: 1104 DLSTSGSSF 1112>NP_056018 Length = 1461 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DISTASSSF 9 D+ST+ SSF Sbjct: 1130 DLSTSGSSF 1138>NP_056324 Length = 275 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISTASSS 8 D STASSS Sbjct: 254 DFSTASSS 261>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISTASSS 8 D STASSS Sbjct: 2921 DASTASSS 2928>NP_060834 Length = 802 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 ISTASSSF 9 ++TASSSF Sbjct: 753 LTTASSSF 760>NP_149016 Length = 589 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISTASSS 8 D STASSS Sbjct: 354 DSSTASSS 361>XP_005265460 Length = 589 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DISTASSS 8 D STASSS Sbjct: 354 DSSTASSS 361>NP_085128 Length = 2136 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ISTASSSF 9 +ST+SSS+ Sbjct: 569 VSTSSSSY 576>NP_775099 Length = 2595 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DISTASSSF 9 D+S +SS+F Sbjct: 1697 DLSVSSSNF 1705>NP_001019554 Length = 2385 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 STA+SSF Sbjct: 1059 STATSSF 1065>NP_056472 Length = 2277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DISTASSSF 9 D+S +SS+F Sbjct: 1379 DLSVSSSNF 1387>NP_004230 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 +TASSSF Sbjct: 140 TTASSSF 146>NP_055718 Length = 2363 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 STA+SSF Sbjct: 1059 STATSSF 1065>NP_005952 Length = 2439 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 +TASSSF Sbjct: 2081 ATASSSF 2087>XP_005276320 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 69 DISSSSSS 76Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 292 DISSSSSS 299>XP_005276319 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 177 DISSSSSS 184Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 322 DISSSSSS 329Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 545 DISSSSSS 552>XP_005276318 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 186 DISSSSSS 193Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 331 DISSSSSS 338Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 554 DISSSSSS 561>XP_005276317 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 186 DISSSSSS 193Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 331 DISSSSSS 338Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 554 DISSSSSS 561>XP_006725067 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 177 DISSSSSS 184Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 322 DISSSSSS 329Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 545 DISSSSSS 552>XP_006725066 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 186 DISSSSSS 193Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 331 DISSSSSS 338Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 554 DISSSSSS 561>XP_006725065 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 186 DISSSSSS 193Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 331 DISSSSSS 338Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 554 DISSSSSS 561>XP_006725064 Length = 929 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 435 DISSSSSS 442>XP_005255623 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 STAS+SF Sbjct: 402 STASTSF 408>XP_005268272 Length = 969 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 +TASSSF Sbjct: 140 TTASSSF 146>XP_005268270 Length = 1950 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 +TASSSF Sbjct: 140 TTASSSF 146>XP_006720384 Length = 1978 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 +TASSSF Sbjct: 139 TTASSSF 145>XP_006719740 Length = 1863 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 STA+SSF Sbjct: 559 STATSSF 565>XP_006719739 Length = 2306 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 STA+SSF Sbjct: 1002 STATSSF 1008>XP_006719738 Length = 2340 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 STA+SSF Sbjct: 1036 STATSSF 1042>XP_005269272 Length = 2356 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 STA+SSF Sbjct: 1059 STATSSF 1065>XP_005248451 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 69 DISSSSSS 76Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 292 DISSSSSS 299>XP_005248450 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 177 DISSSSSS 184Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 322 DISSSSSS 329Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 545 DISSSSSS 552>XP_005248449 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 186 DISSSSSS 193Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 331 DISSSSSS 338Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 554 DISSSSSS 561>XP_005248448 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 186 DISSSSSS 193Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 331 DISSSSSS 338Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 554 DISSSSSS 561>XP_006710226 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DISTASSS 8 DIS++SSS Sbjct: 244 DISSSSSS 251>NP_076936 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 STASSSF 9 STAS+SF Sbjct: 402 STASTSF 408Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.105 0.243 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 309,588 Number of extensions: 649 Number of successful extensions: 57 Number of sequences better than 10000.0: 37 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |