Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 20 509 XP_006713721 20 509 NP_006293 18 1482 NP_001139630 18 1482 NP_004941 17 3301 NP_001273415 16 5631 NP_001273414 16 5631 NP_899180 16 5631 NP_003825 16 5631 XP_006725534 16 5631 NP_443155 16 5631 NP_690043 16 7355 NP_000780 16 7355 NP_001171528 16 7355 NP_002273 16 7355 NP_002272 16 7355 NP_002274 16 7355 NP_002275 16 7355 NP_945327 16 7355 XP_006721800 16 7355 XP_005257167 16 7355 XP_005268923 16 7355 XP_005268922 16 7355 XP_005268921 16 7355 XP_005275778 16 7355 NP_055661 15 9605 NP_859063 15 9605 NP_003012 15 9605 NP_061820 15 9605 NP_001121167 15 9605 NP_001161066 15 9605 NP_000299 15 9605 NP_001123363 15 9605 XP_005251177 15 9605>NP_006209 Length = 1068 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DIAYIRKAL 9 DIAYIRK L Sbjct: 1018 DIAYIRKTL 1026>XP_006713721 Length = 1068 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DIAYIRKAL 9 DIAYIRK L Sbjct: 1018 DIAYIRKTL 1026>NP_006293 Length = 837 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DIAYIRKAL 9 D+A++RKAL Sbjct: 530 DLAFLRKAL 538>NP_001139630 Length = 731 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DIAYIRKAL 9 D+A++RKAL Sbjct: 424 DLAFLRKAL 432>NP_004941 Length = 322 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DIAYIRKAL 9 ++ YIRKAL Sbjct: 283 NLTYIRKAL 291>NP_001273415 Length = 283 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DIAYIRKAL 9 +I Y RKAL Sbjct: 45 EIEYFRKAL 53>NP_001273414 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DIAYIRKAL 9 +I Y RKAL Sbjct: 218 EIEYFRKAL 226>NP_899180 Length = 467 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DIAYIRKAL 9 +I Y RKAL Sbjct: 229 EIEYFRKAL 237>NP_003825 Length = 446 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DIAYIRKAL 9 +I Y RKAL Sbjct: 208 EIEYFRKAL 216>XP_006725534 Length = 1174 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DIAYIRKAL 9 DIA++RK + Sbjct: 1019 DIAHLRKVI 1027>NP_443155 Length = 1325 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DIAYIRKAL 9 DIA++RK + Sbjct: 1170 DIAHLRKVI 1178>NP_690043 Length = 732 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYIRKAL 9 AY+R+AL Sbjct: 280 AYVRRAL 286>NP_000780 Length = 1306 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYIRKAL 9 AY+R+AL Sbjct: 854 AYVRRAL 860>NP_001171528 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYIRKAL 9 AY+R+AL Sbjct: 280 AYVRRAL 286>NP_002273 Length = 493 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIAYIRKA 8 D AY+RK+ Sbjct: 221 DCAYLRKS 228>NP_002272 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIAYIRKA 8 D AY+RK+ Sbjct: 216 DCAYLRKS 223>NP_002274 Length = 507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIAYIRKA 8 D AY+RK+ Sbjct: 233 DCAYLRKS 240>NP_002275 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIAYIRKA 8 D AY+RK+ Sbjct: 216 DCAYLRKS 223>NP_945327 Length = 599 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAYIRKAL 9 ++YIRK L Sbjct: 522 VSYIRKCL 529>XP_006721800 Length = 616 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYIRKAL 9 AY+R+AL Sbjct: 164 AYVRRAL 170>XP_005257167 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYIRKAL 9 AY+R+AL Sbjct: 671 AYVRRAL 677>XP_005268923 Length = 563 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIAYIRKA 8 D AY+RK+ Sbjct: 293 DCAYLRKS 300>XP_005268922 Length = 295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIAYIRKA 8 D AY+RK+ Sbjct: 21 DCAYLRKS 28>XP_005268921 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIAYIRKA 8 D AY+RK+ Sbjct: 221 DCAYLRKS 228>XP_005275778 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIAYIRKA 8 D AY+RK+ Sbjct: 221 DCAYLRKS 228>NP_055661 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAYIRKAL 9 ++Y+RK L Sbjct: 620 VSYVRKVL 627>NP_859063 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DIAYIRKAL 9 +++Y RKAL Sbjct: 124 EVSYHRKAL 132>NP_003012 Length = 313 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IAYIRKAL 9 +AY +KAL Sbjct: 179 VAYYKKAL 186>NP_061820 Length = 105 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 IAYIRKA 8 IAY++KA Sbjct: 96 IAYLKKA 102>NP_001121167 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 YIRKAL 9 Y+RKAL Sbjct: 345 YVRKAL 350>NP_001161066 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 YIRKAL 9 Y+RKAL Sbjct: 346 YVRKAL 351>NP_000299 Length = 498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 YIRKAL 9 Y+RKAL Sbjct: 363 YVRKAL 368>NP_001123363 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DIAYIRKA 8 D+AY+R A Sbjct: 147 DLAYLRLA 154>XP_005251177 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IAYIRKAL 9 ++Y+RK L Sbjct: 472 VSYVRKVL 479Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.148 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 341,440 Number of extensions: 341 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |