Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 20 390 NP_004371 17 3301 NP_001073315 17 3301 XP_005255182 17 3301 XP_006720911 17 3301 XP_005255181 17 3301 NP_056540 17 4312 NP_620688 16 5631 NP_079410 16 5631 NP_055983 16 5631 XP_005258735 16 5631 XP_005258734 16 5631 XP_005258733 16 5631 XP_006723176 16 5631 XP_005256233 16 5631 XP_005256232 16 5631 XP_005256231 16 5631 XP_005256229 16 5631 XP_005256228 16 5631 XP_005256227 16 5631 XP_006721346 16 5631 XP_005256226 16 5631 XP_006721345 16 5631 XP_006721344 16 5631 XP_006721343 16 5631 XP_005256225 16 5631 XP_005254929 16 5631 NP_005155 16 5631 NP_009186 16 7355 NP_002838 16 7355 NP_056128 16 7355 NP_001185594 16 7355 NP_001073876 16 7355 XP_005271537 16 7355 XP_005271535 16 7355 XP_006718868 16 7355 XP_006718823 16 7355 XP_006716138 16 7355 NP_570857 16 7355 NP_570858 16 7355 NP_001129386 16 7355 YP_003024026 16 7355 NP_059990 15 9605 NP_055509 15 9605 NP_001138792 15 9605 XP_005266493 15 9605 XP_005266492 15 9605 XP_005272296 15 9605 XP_006717400 15 9605 XP_006717399 15 9605 XP_005272294 15 9605>NP_115803 Length = 1156 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DGQSQIMSG 9 +GQSQIMSG Sbjct: 223 NGQSQIMSG 231>NP_004371 Length = 2442 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GQSQIMSG 9 GQ+Q+M+G Sbjct: 204 GQAQVMNG 211>NP_001073315 Length = 2404 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GQSQIMSG 9 GQ+Q+M+G Sbjct: 204 GQAQVMNG 211>XP_005255182 Length = 2303 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GQSQIMSG 9 GQ+Q+M+G Sbjct: 204 GQAQVMNG 211>XP_006720911 Length = 2355 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GQSQIMSG 9 GQ+Q+M+G Sbjct: 204 GQAQVMNG 211>XP_005255181 Length = 2427 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GQSQIMSG 9 GQ+Q+M+G Sbjct: 204 GQAQVMNG 211>NP_056540 Length = 331 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGQSQIMSG 9 +GQSQ++ G Sbjct: 2 NGQSQVLPG 10>NP_620688 Length = 1095 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GQSQIMSG 9 G+S IMSG Sbjct: 408 GRSHIMSG 415>NP_079410 Length = 2881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>NP_055983 Length = 1303 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GQSQIMSG 9 GQS ++SG Sbjct: 1138 GQSSVLSG 1145>XP_005258735 Length = 1254 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GQSQIMSG 9 GQS ++SG Sbjct: 1089 GQSSVLSG 1096>XP_005258734 Length = 1262 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GQSQIMSG 9 GQS ++SG Sbjct: 1097 GQSSVLSG 1104>XP_005258733 Length = 1267 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GQSQIMSG 9 GQS ++SG Sbjct: 1102 GQSSVLSG 1109>XP_006723176 Length = 1303 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GQSQIMSG 9 GQS ++SG Sbjct: 1138 GQSSVLSG 1145>XP_005256233 Length = 2391 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1255 DGDGQLMEG 1263>XP_005256232 Length = 2424 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1288 DGDGQLMEG 1296>XP_005256231 Length = 2573 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>XP_005256229 Length = 2881 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>XP_005256228 Length = 2882 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>XP_005256227 Length = 2897 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>XP_006721346 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>XP_005256226 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>XP_006721345 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>XP_006721344 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>XP_006721343 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>XP_005256225 Length = 2898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGQSQIMSG 9 DG Q+M G Sbjct: 1762 DGDGQLMEG 1770>XP_005254929 Length = 1122 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GQSQIMSG 9 G+S IMSG Sbjct: 408 GRSHIMSG 415>NP_005155 Length = 740 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 DGQ Q+M Sbjct: 375 DGQKQVM 381>NP_009186 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGQSQIMSG 9 DG+S ++SG Sbjct: 15 DGRSGLLSG 23>NP_002838 Length = 1015 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DGQSQIMSG 9 DG +++M+G Sbjct: 330 DGMAELMAG 338>NP_056128 Length = 1544 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 D QSQIM Sbjct: 1498 DSQSQIM 1504>NP_001185594 Length = 1525 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 D QSQIM Sbjct: 1479 DSQSQIM 1485>NP_001073876 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DGQSQIMSG 9 DG+ ++SG Sbjct: 258 DGEKHVLSG 266>XP_005271537 Length = 1441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 D QSQIM Sbjct: 1395 DSQSQIM 1401>XP_005271535 Length = 1504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 D QSQIM Sbjct: 1458 DSQSQIM 1464>XP_006718868 Length = 1519 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 D QSQIM Sbjct: 1473 DSQSQIM 1479>XP_006718823 Length = 1011 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DGQSQIMSG 9 DG+ ++SG Sbjct: 616 DGEKHVLSG 624>XP_006716138 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DGQSQIMSG 9 DG +++M+G Sbjct: 330 DGMAELMAG 338>NP_570857 Length = 998 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DGQSQIMSG 9 DG +++M+G Sbjct: 313 DGMAELMAG 321>NP_570858 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DGQSQIMSG 9 DG +++M+G Sbjct: 330 DGMAELMAG 338>NP_001129386 Length = 1503 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DGQSQI 6 DGQSQ+ Sbjct: 1261 DGQSQV 1266>YP_003024026 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 DGQSQIMSG 9 +G+S+++SG Sbjct: 202 EGESELVSG 210>NP_059990 Length = 860 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DGQSQIMS 8 DG+ QI+S Sbjct: 526 DGRQQILS 533>NP_055509 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 DGQ Q+M Sbjct: 156 DGQRQLM 162>NP_001138792 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 DGQ Q+M Sbjct: 156 DGQRQLM 162>XP_005266493 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DGQSQIMS 8 DG+ QI+S Sbjct: 526 DGRQQILS 533>XP_005266492 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DGQSQIMS 8 DG+ QI+S Sbjct: 526 DGRQQILS 533>XP_005272296 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 DGQ Q+M Sbjct: 156 DGQRQLM 162>XP_006717400 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 DGQ Q+M Sbjct: 156 DGQRQLM 162>XP_006717399 Length = 1002 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 DGQ Q+M Sbjct: 265 DGQRQLM 271>XP_005272294 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DGQSQIM 7 DGQ Q+M Sbjct: 265 DGQRQLM 271Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.123 0.323 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 461,692 Number of extensions: 785 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |