Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 18 1135 XP_006718908 18 1135 XP_005271621 18 1135 XP_006718907 18 1135 XP_006718906 18 1135 XP_005271619 18 1135 XP_005271618 18 1135 NP_038466 17 2528 NP_444295 17 2528 NP_064516 17 2528 NP_038472 17 2528 NP_059509 17 2528 XP_005252005 17 2528 XP_005245405 17 2528 XP_005245404 17 2528 NP_060678 17 4312 NP_002783 17 4312 XP_005245361 17 4312 XP_005245360 17 4312 XP_005245359 17 4312 NP_003468 16 5631 NP_001128496 16 5631 NP_001158058 16 5631 XP_005253477 16 5631 XP_006711681 16 5631 XP_005245637 16 5631 NP_001034570 16 5631 NP_061108 16 5631 NP_001073922 16 7355 NP_001193849 16 7355 NP_001274152 15 9605 NP_001006639 15 9605 NP_783865 15 9605 NP_001157462 15 9605 NP_001157461 15 9605 NP_057715 15 9605 NP_054858 15 9605 NP_037461 15 9605 NP_002502 15 9605 XP_006724130 15 9605 XP_006724129 15 9605 XP_005257346 15 9605 XP_005257345 15 9605>NP_000042 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DGI VKLVV Sbjct: 1641 DGIMVKLVV 1649>XP_006718908 Length = 1708 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DGI VKLVV Sbjct: 293 DGIMVKLVV 301>XP_005271621 Length = 2708 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DGI VKLVV Sbjct: 1293 DGIMVKLVV 1301>XP_006718907 Length = 3050 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DGI VKLVV Sbjct: 1635 DGIMVKLVV 1643>XP_006718906 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DGI VKLVV Sbjct: 1641 DGIMVKLVV 1649>XP_005271619 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DGI VKLVV Sbjct: 1641 DGIMVKLVV 1649>XP_005271618 Length = 3056 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DGI VKLVV Sbjct: 1641 DGIMVKLVV 1649>NP_038466 Length = 589 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+TV LV+ Sbjct: 98 DGLTVHLVI 106>NP_444295 Length = 561 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+TV LV+ Sbjct: 98 DGLTVHLVI 106>NP_064516 Length = 601 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+TV LV+ Sbjct: 74 DGLTVHLVI 82>NP_038472 Length = 624 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+TV LV+ Sbjct: 94 DGLTVHLVI 102>NP_059509 Length = 655 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+TV LV+ Sbjct: 83 DGLTVHLVI 91>XP_005252005 Length = 449 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+TV LV+ Sbjct: 98 DGLTVHLVI 106>XP_005245405 Length = 427 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+TV LV+ Sbjct: 74 DGLTVHLVI 82>XP_005245404 Length = 565 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+TV LV+ Sbjct: 74 DGLTVHLVI 82>NP_060678 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DGITVKLV 8 DGIT KLV Sbjct: 90 DGITNKLV 97>NP_002783 Length = 248 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 D +T+KLV+ Sbjct: 184 DDLTIKLVI 192>XP_005245361 Length = 345 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DGITVKLV 8 DGIT KLV Sbjct: 90 DGITNKLV 97>XP_005245360 Length = 353 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DGITVKLV 8 DGIT KLV Sbjct: 90 DGITNKLV 97>XP_005245359 Length = 394 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 DGITVKLV 8 DGIT KLV Sbjct: 90 DGITNKLV 97>NP_003468 Length = 501 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DGITVKLVV 9 DGI K+VV Sbjct: 107 DGILAKIVV 115>NP_001128496 Length = 486 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DGITVKLVV 9 DGI K+VV Sbjct: 92 DGILAKIVV 100>NP_001158058 Length = 3708 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+T +LVV Sbjct: 361 DGLTHRLVV 369>XP_005253477 Length = 273 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGITVKLV 8 DGIT KL+ Sbjct: 145 DGITNKLI 152>XP_006711681 Length = 3448 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+T +LVV Sbjct: 361 DGLTHRLVV 369>XP_005245637 Length = 3683 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGITVKLVV 9 DG+T +LVV Sbjct: 361 DGLTHRLVV 369>NP_001034570 Length = 258 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGITVKLV 8 DGIT KL+ Sbjct: 145 DGITNKLI 152>NP_061108 Length = 452 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGITVKLV 8 DGIT KL+ Sbjct: 145 DGITNKLI 152>NP_001073922 Length = 2190 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GITVKLVV 9 G T+KLV+ Sbjct: 439 GTTIKLVI 446>NP_001193849 Length = 484 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DGITVKL 7 DG+T+KL Sbjct: 204 DGLTLKL 210>NP_001274152 Length = 1791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GITVKLV 8 GIT+KL+ Sbjct: 213 GITIKLL 219>NP_001006639 Length = 223 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGITVKLVV 9 DG+ VKL + Sbjct: 75 DGVRVKLQI 83>NP_783865 Length = 216 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGITVKLVV 9 DG+ VKL + Sbjct: 68 DGVRVKLQI 76>NP_001157462 Length = 186 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGITVKLVV 9 DG+ VKL + Sbjct: 38 DGVRVKLQI 46>NP_001157461 Length = 228 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGITVKLVV 9 DG+ VKL + Sbjct: 80 DGVRVKLQI 88>NP_057715 Length = 917 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GITVKLV 8 GIT+KL+ Sbjct: 709 GITLKLI 715>NP_054858 Length = 1791 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GITVKLV 8 GIT+KL+ Sbjct: 213 GITIKLL 219>NP_037461 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GITVKLV 8 GIT+KL+ Sbjct: 709 GITLKLI 715>NP_002502 Length = 390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGITVKLVV 9 DG T +LV+ Sbjct: 34 DGTTTELVI 42>XP_006724130 Length = 757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GITVKLV 8 GIT+KL+ Sbjct: 709 GITLKLI 715>XP_006724129 Length = 882 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 GITVKLV 8 GIT+KL+ Sbjct: 709 GITLKLI 715>XP_005257346 Length = 191 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGITVKLVV 9 DG+ VKL + Sbjct: 43 DGVRVKLQI 51>XP_005257345 Length = 196 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGITVKLVV 9 DG+ VKL + Sbjct: 48 DGVRVKLQI 56Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.148 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 323,610 Number of extensions: 451 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |