Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 20 509 NP_115996 17 2528 NP_001258925 17 2528 NP_001258924 17 2528 NP_001269359 17 2528 XP_006712188 17 2528 XP_006712187 17 2528 NP_001009812 17 2528 XP_006718243 17 3301 XP_006718242 17 3301 XP_006718240 17 3301 NP_001165375 17 4312 NP_055518 17 4312 XP_005276812 17 4312 XP_006713491 17 4312 XP_005276811 17 4312 XP_006713490 17 4312 XP_005276810 17 4312 XP_005276809 17 4312 XP_006713489 17 4312 XP_005276808 17 4312 NP_078966 16 5631 NP_079489 16 5631 NP_066022 16 5631 XP_006723369 16 5631 XP_006723004 16 5631 NP_060529 16 7355 NP_001129396 16 7355 NP_002196 15 9605 NP_001092010 15 9605 NP_001186759 15 9605 NP_006656 15 9605 NP_055553 15 9605 NP_065961 15 9605 NP_001158137 15 9605 XP_006726631 15 9605 XP_006725632 15 9605 XP_005257924 15 9605 XP_005257923 15 9605 XP_005257922 15 9605 XP_005257921 15 9605 XP_006722263 15 9605 XP_005257920 15 9605 XP_006720880 15 9605 XP_005272289 15 9605 XP_006716135 15 9605 XP_006716134 15 9605 XP_006710311 15 9605 NP_003925 15 9605>NP_002430 Length = 1137 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DGISTRMGA 9 DGI TRMGA Sbjct: 933 DGIFTRMGA 941>NP_115996 Length = 461 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DGISTRMGA 9 DG+ TRM A Sbjct: 269 DGLETRMSA 277>NP_001258925 Length = 459 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DGISTRMGA 9 DG+ TRM A Sbjct: 267 DGLETRMSA 275>NP_001258924 Length = 460 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DGISTRMGA 9 DG+ TRM A Sbjct: 268 DGLETRMSA 276>NP_001269359 Length = 198 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DGISTRMG 8 DG++TR+G Sbjct: 116 DGLATRLG 123>XP_006712188 Length = 198 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DGISTRMG 8 DG++TR+G Sbjct: 116 DGLATRLG 123>XP_006712187 Length = 198 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DGISTRMG 8 DG++TR+G Sbjct: 116 DGLATRLG 123>NP_001009812 Length = 194 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DGISTRMG 8 DG++TR+G Sbjct: 112 DGLATRLG 119>XP_006718243 Length = 216 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGISTRMGA 9 DG++ R+GA Sbjct: 29 DGLNARLGA 37>XP_006718242 Length = 258 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGISTRMGA 9 DG++ R+GA Sbjct: 29 DGLNARLGA 37>XP_006718240 Length = 413 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGISTRMGA 9 DG++ R+GA Sbjct: 29 DGLNARLGA 37>NP_001165375 Length = 1506 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 +GI+TR+G+ Sbjct: 906 NGIATRLGS 914>NP_055518 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 +GI+TR+G+ Sbjct: 907 NGIATRLGS 915>XP_005276812 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 +GI+TR+G+ Sbjct: 907 NGIATRLGS 915>XP_006713491 Length = 1425 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 +GI+TR+G+ Sbjct: 825 NGIATRLGS 833>XP_005276811 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 +GI+TR+G+ Sbjct: 907 NGIATRLGS 915>XP_006713490 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 +GI+TR+G+ Sbjct: 907 NGIATRLGS 915>XP_005276810 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 +GI+TR+G+ Sbjct: 907 NGIATRLGS 915>XP_005276809 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 +GI+TR+G+ Sbjct: 907 NGIATRLGS 915>XP_006713489 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 +GI+TR+G+ Sbjct: 907 NGIATRLGS 915>XP_005276808 Length = 1507 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 +GI+TR+G+ Sbjct: 907 NGIATRLGS 915>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGISTRMGA 9 DG++TR+ A Sbjct: 13229 DGVATRVDA 13237>NP_079489 Length = 678 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 DGI++++GA Sbjct: 635 DGIASQIGA 643>NP_066022 Length = 2564 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 DGI++++GA Sbjct: 1959 DGIASQIGA 1967>XP_006723369 Length = 2394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DGISTRMGA 9 DGI++++GA Sbjct: 1959 DGIASQIGA 1967>XP_006723004 Length = 6443 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGISTRMGA 9 DG++TR+ A Sbjct: 5165 DGVATRVDA 5173>NP_060529 Length = 1075 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGISTRMGA 9 DG+ T +GA Sbjct: 992 DGMHTHLGA 1000>NP_001129396 Length = 1590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DGISTRMG 8 DGI+ R+G Sbjct: 254 DGINLRLG 261>NP_002196 Length = 1049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGISTRMGA 9 DG+S +GA Sbjct: 72 DGVSVLVGA 80>NP_001092010 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GISTRMG 8 G+S RMG Sbjct: 370 GLSARMG 376>NP_001186759 Length = 485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GISTRMG 8 G+S RMG Sbjct: 312 GLSARMG 318>NP_006656 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 GISTRMG 8 G+S RMG Sbjct: 370 GLSARMG 376>NP_055553 Length = 1356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DGISTR 6 DG+STR Sbjct: 451 DGLSTR 456>NP_065961 Length = 1934 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GISTRMGA 9 GI++R+GA Sbjct: 1828 GIASRIGA 1835>NP_001158137 Length = 1950 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GISTRMGA 9 GI++R+GA Sbjct: 1828 GIASRIGA 1835>XP_006726631 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISTRMGA 9 IST MGA Sbjct: 81 ISTHMGA 87>XP_006725632 Length = 119 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISTRMGA 9 IST MGA Sbjct: 81 ISTHMGA 87>XP_005257924 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DGISTR 6 DG+STR Sbjct: 183 DGLSTR 188>XP_005257923 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DGISTR 6 DG+STR Sbjct: 192 DGLSTR 197>XP_005257922 Length = 1366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DGISTR 6 DG+STR Sbjct: 461 DGLSTR 466>XP_005257921 Length = 1370 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DGISTR 6 DG+STR Sbjct: 461 DGLSTR 466>XP_006722263 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DGISTR 6 DG+STR Sbjct: 451 DGLSTR 456>XP_005257920 Length = 1390 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DGISTR 6 DG+STR Sbjct: 451 DGLSTR 456>XP_006720880 Length = 232 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISTRMGA 9 IST MGA Sbjct: 81 ISTHMGA 87>XP_005272289 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DGISTRMGA 9 DG+ ++GA Sbjct: 62 DGVGNQLGA 70>XP_006716135 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GISTRMGA 9 GI++R+GA Sbjct: 612 GIASRIGA 619>XP_006716134 Length = 1847 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 GISTRMGA 9 GI++R+GA Sbjct: 1725 GIASRIGA 1732>XP_006710311 Length = 119 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 ISTRMGA 9 IST MGA Sbjct: 81 ISTHMGA 87>NP_003925 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DGISTRMGA 9 DG+ ++GA Sbjct: 62 DGVGNQLGA 70Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.132 0.367 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 366,485 Number of extensions: 593 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |