Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 299 XP_005262424 20 299 NP_061119 19 869 NP_613258 19 869 NP_613075 19 869 NP_001035248 19 869 NP_004884 19 869 XP_005272192 19 869 XP_005272191 19 869 XP_005272189 19 869 NP_000382 17 2528 NP_004317 17 4312 NP_001010986 17 4312 NP_775965 17 4312 XP_006724816 17 4312 XP_006724815 17 4312 XP_006724814 17 4312 XP_005262462 17 4312 XP_005277475 17 4312 XP_005277474 17 4312 XP_006711546 17 4312 XP_005273028 17 4312 NP_000304 16 5631 NP_005397 16 5631 NP_001167522 16 5631 NP_006021 16 5631 NP_001278030 16 5631 NP_001005505 16 5631 NP_001138890 16 5631 NP_004451 16 5631 NP_001239586 16 5631 XP_006724234 16 5631 XP_005261462 16 5631 XP_005247683 16 5631 XP_005265638 16 5631 XP_006713052 16 5631 XP_006713051 16 5631 NP_060644 16 5631 NP_001005284 16 5631 NP_006493 16 7355 NP_005132 16 7355 NP_001171670 16 7355 NP_057036 16 7355 XP_006715181 16 7355 XP_005249243 16 7355 NP_060791 16 7355 NP_000129 15 9605 NP_004685 15 9605 NP_001167637 15 9605 NP_699196 15 9605 NP_055401 15 9605 NP_997254 15 9605 XP_006722232 15 9605 XP_005257846 15 9605 XP_005252508 15 9605 XP_006717511 15 9605 XP_005252507 15 9605 XP_005248199 15 9605 XP_005248198 15 9605 XP_005248197 15 9605 XP_005248196 15 9605>NP_722576 Length = 3080 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DGFTVLSNR 9 DGFTVLS+R Sbjct: 1476 DGFTVLSDR 1484>XP_005262424 Length = 2875 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DGFTVLSNR 9 DGFTVLS+R Sbjct: 1271 DGFTVLSDR 1279>NP_061119 Length = 372 Score = 18.9 bits (37), Expect = 869 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DGFTVLSNR 9 DGFT+LS++ Sbjct: 181 DGFTILSSK 189>NP_613258 Length = 372 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DGFTVLSNR 9 DGFTVLS + Sbjct: 181 DGFTVLSTK 189>NP_613075 Length = 369 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DGFTVLSNR 9 DGFTVLS + Sbjct: 181 DGFTVLSTK 189>NP_001035248 Length = 371 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DGFTVLSNR 9 DGFTVLS + Sbjct: 180 DGFTVLSTK 188>NP_004884 Length = 371 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DGFTVLSNR 9 DGFTVLS + Sbjct: 180 DGFTVLSTK 188>XP_005272192 Length = 198 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DGFTVLSNR 9 DGFTVLS + Sbjct: 180 DGFTVLSTK 188>XP_005272191 Length = 199 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DGFTVLSNR 9 DGFTVLS + Sbjct: 181 DGFTVLSTK 189>XP_005272189 Length = 368 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DGFTVLSNR 9 DGFTVLS + Sbjct: 180 DGFTVLSTK 188>NP_000382 Length = 563 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DGFTVLSNR 9 DG+ V+SNR Sbjct: 457 DGYWVVSNR 465>NP_004317 Length = 1426 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DGFTVLSN 8 D FTVL N Sbjct: 1202 DSFTVLGN 1209>NP_001010986 Length = 1119 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GFTVLSNR 9 GFT L NR Sbjct: 512 GFTFLGNR 519>NP_775965 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GFTVLSNR 9 GFT L NR Sbjct: 512 GFTFLGNR 519>XP_006724816 Length = 1105 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GFTVLSNR 9 GFT L NR Sbjct: 509 GFTFLGNR 516>XP_006724815 Length = 1105 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GFTVLSNR 9 GFT L NR Sbjct: 509 GFTFLGNR 516>XP_006724814 Length = 1116 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GFTVLSNR 9 GFT L NR Sbjct: 509 GFTFLGNR 516>XP_005262462 Length = 1129 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GFTVLSNR 9 GFT L NR Sbjct: 509 GFTFLGNR 516>XP_005277475 Length = 1352 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DGFTVLSN 8 D FTVL N Sbjct: 1128 DSFTVLGN 1135>XP_005277474 Length = 1414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DGFTVLSN 8 D FTVL N Sbjct: 1190 DSFTVLGN 1197>XP_006711546 Length = 1426 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DGFTVLSN 8 D FTVL N Sbjct: 1202 DSFTVLGN 1209>XP_005273028 Length = 1426 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DGFTVLSN 8 D FTVL N Sbjct: 1202 DSFTVLGN 1209>NP_000304 Length = 676 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGFTVLSNR 9 +GF +LSN+ Sbjct: 188 NGFVMLSNK 196>NP_005397 Length = 1354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 GFTVLSNR 9 GFT SNR Sbjct: 396 GFTYYSNR 403>NP_001167522 Length = 1150 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GFTVLSNR 9 GF VLSN+ Sbjct: 897 GFLVLSNQ 904>NP_006021 Length = 1143 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GFTVLSNR 9 GF VLSN+ Sbjct: 890 GFLVLSNQ 897>NP_001278030 Length = 1076 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GFTVLSNR 9 GF VLSN+ Sbjct: 821 GFLVLSNQ 828>NP_001005505 Length = 1145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GFTVLSNR 9 GF VLSN+ Sbjct: 890 GFLVLSNQ 897>NP_001138890 Length = 2481 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DGFTVLSN 8 +GF+++SN Sbjct: 2057 EGFSIISN 2064>NP_004451 Length = 760 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FTVLSNR 9 +T+LSNR Sbjct: 87 YTILSNR 93>NP_001239586 Length = 630 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGFTVLSN 8 D FTV+SN Sbjct: 187 DKFTVVSN 194>XP_006724234 Length = 2363 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DGFTVLSN 8 +GF+++SN Sbjct: 1939 EGFSIISN 1946>XP_005261462 Length = 2473 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DGFTVLSN 8 +GF+++SN Sbjct: 2049 EGFSIISN 2056>XP_005247683 Length = 708 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DGFTVLSNR 9 +GF +LSN+ Sbjct: 220 NGFVMLSNK 228>XP_005265638 Length = 1144 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 GFTVLSNR 9 GF VLSN+ Sbjct: 891 GFLVLSNQ 898>XP_006713052 Length = 396 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGFTVLSN 8 D FTV+SN Sbjct: 187 DKFTVVSN 194>XP_006713051 Length = 618 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGFTVLSN 8 D FTV+SN Sbjct: 187 DKFTVVSN 194>NP_060644 Length = 1059 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DGFTVLSN 8 +GFTVL N Sbjct: 259 NGFTVLVN 266>NP_001005284 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GFTVLSN 8 GFTVLS+ Sbjct: 219 GFTVLSS 225>NP_006493 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DGFTVLSN 8 D FTV+ N Sbjct: 398 DAFTVIKN 405>NP_005132 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GFTVLSNR 9 G+TV+ NR Sbjct: 278 GWTVIQNR 285>NP_001171670 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GFTVLSNR 9 G+TV+ NR Sbjct: 219 GWTVIQNR 226>NP_057036 Length = 243 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DGFTVLS 7 D FTVLS Sbjct: 21 DSFTVLS 27>XP_006715181 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DGFTVLSN 8 D FTV+ N Sbjct: 246 DAFTVIKN 253>XP_005249243 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DGFTVLSN 8 D FTV+ N Sbjct: 336 DAFTVIKN 343>NP_060791 Length = 353 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 FTVLSNR 9 FT+L NR Sbjct: 208 FTILDNR 214>NP_000129 Length = 2871 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FTVLSNR 9 FTV+SN+ Sbjct: 187 FTVISNQ 193>NP_004685 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TVLSNR 9 TVLSNR Sbjct: 82 TVLSNR 87>NP_001167637 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TVLSNR 9 TVLSNR Sbjct: 82 TVLSNR 87>NP_699196 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGFTVLSNR 9 D FT+ NR Sbjct: 557 DRFTICGNR 565>NP_055401 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TVLSNR 9 TVLSNR Sbjct: 365 TVLSNR 370>NP_997254 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGFTVLSNR 9 D FTV++ R Sbjct: 821 DDFTVINRR 829>XP_006722232 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TVLSNR 9 TVLSNR Sbjct: 82 TVLSNR 87>XP_005257846 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TVLSNR 9 TVLSNR Sbjct: 82 TVLSNR 87>XP_005252508 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGFTVLSNR 9 D FTV++ R Sbjct: 821 DDFTVINRR 829>XP_006717511 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGFTVLSNR 9 D FTV++ R Sbjct: 821 DDFTVINRR 829>XP_005252507 Length = 908 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DGFTVLSNR 9 D FTV++ R Sbjct: 821 DDFTVINRR 829>XP_005248199 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGFTVLSNR 9 D FT+ NR Sbjct: 416 DRFTICGNR 424>XP_005248198 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGFTVLSNR 9 D FT+ NR Sbjct: 416 DRFTICGNR 424>XP_005248197 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGFTVLSNR 9 D FT+ NR Sbjct: 431 DRFTICGNR 439>XP_005248196 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DGFTVLSNR 9 D FT+ NR Sbjct: 431 DRFTICGNR 439Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.140 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 488,528 Number of extensions: 842 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |