Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 22 103 NP_001075109 22 103 NP_663782 17 4312 NP_001118 17 4312 NP_001159491 17 4312 NP_112224 16 5631 NP_060626 16 5631 NP_056193 16 5631 NP_056415 16 5631 NP_001035937 16 5631 XP_005253212 16 5631 XP_005253211 16 5631 NP_003195 15 9605 NP_078863 15 9605 NP_055178 15 9605 NP_003244 15 9605 NP_001264984 15 9605 NP_006043 15 9605 NP_078881 15 9605 XP_005261097 15 9605 XP_005261096 15 9605 XP_005261095 15 9605 XP_005261094 15 9605 XP_005260968 15 9605 XP_005260966 15 9605 XP_005257472 15 9605 XP_005257470 15 9605 XP_005257469 15 9605 XP_005257468 15 9605 XP_005257467 15 9605 XP_005257995 15 9605 XP_005257994 15 9605 XP_005266395 15 9605 XP_005263274 15 9605 XP_005263272 15 9605 XP_005263271 15 9605 XP_005271253 15 9605 XP_005271252 15 9605 XP_005271251 15 9605 NP_001273 15 9605 NP_001025177 15 9605>NP_008835 Length = 4128 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DFKVEFMRN 9 DFKVEF+RN Sbjct: 3689 DFKVEFLRN 3697>NP_001075109 Length = 4097 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DFKVEFMRN 9 DFKVEF+RN Sbjct: 3689 DFKVEFLRN 3697>NP_663782 Length = 939 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 DF ++F RN Sbjct: 754 DFAIQFNRN 762>NP_001118 Length = 949 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 DF ++F RN Sbjct: 761 DFAIQFNRN 769>NP_001159491 Length = 919 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 DF ++F RN Sbjct: 734 DFAIQFNRN 742>NP_112224 Length = 1849 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 +FKVEF N Sbjct: 1327 NFKVEFALN 1335>NP_060626 Length = 4363 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DFKVEFMRN 9 DF+VEF ++ Sbjct: 1649 DFEVEFSKD 1657>NP_056193 Length = 4388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DFKVEFMRN 9 DF+VEF ++ Sbjct: 1649 DFEVEFSKD 1657>NP_056415 Length = 404 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DFKVEFM 7 DFKV+F+ Sbjct: 356 DFKVQFV 362>NP_001035937 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DFKVEFM 7 DFKV+F+ Sbjct: 356 DFKVQFV 362>XP_005253212 Length = 1838 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 +FKVEF N Sbjct: 1316 NFKVEFALN 1324>XP_005253211 Length = 1881 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 +FKVEF N Sbjct: 1359 NFKVEFALN 1367>NP_003195 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVEFMRN 9 KVEF+R+ Sbjct: 700 KVEFLRS 706>NP_078863 Length = 277 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEFMRN 9 V+FMRN Sbjct: 268 VDFMRN 273>NP_055178 Length = 4579 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEFMRN 9 VEF+RN Sbjct: 3583 VEFLRN 3588>NP_003244 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DFKVEFMR 8 +F+VEF++ Sbjct: 1093 EFQVEFLK 1100>NP_001264984 Length = 4432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEFMRN 9 VEF+RN Sbjct: 3436 VEFLRN 3441>NP_006043 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 +FKVEF N Sbjct: 267 NFKVEFEVN 275>NP_078881 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DFKVEFM 7 DFK EF+ Sbjct: 66 DFKFEFI 72>XP_005261097 Length = 1452 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DFKVEFMR 8 +F+VEF++ Sbjct: 1093 EFQVEFLK 1100>XP_005261096 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DFKVEFMR 8 +F+VEF++ Sbjct: 1093 EFQVEFLK 1100>XP_005261095 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DFKVEFMR 8 +F+VEF++ Sbjct: 1093 EFQVEFLK 1100>XP_005261094 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DFKVEFMR 8 +F+VEF++ Sbjct: 1093 EFQVEFLK 1100>XP_005260968 Length = 172 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 +FKVEF N Sbjct: 142 NFKVEFEVN 150>XP_005260966 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 +FKVEF N Sbjct: 240 NFKVEFEVN 248>XP_005257472 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVEFMRN 9 KVEF+R+ Sbjct: 659 KVEFLRS 665>XP_005257470 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVEFMRN 9 KVEF+R+ Sbjct: 670 KVEFLRS 676>XP_005257469 Length = 742 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVEFMRN 9 KVEF+R+ Sbjct: 670 KVEFLRS 676>XP_005257468 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVEFMRN 9 KVEF+R+ Sbjct: 689 KVEFLRS 695>XP_005257467 Length = 772 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KVEFMRN 9 KVEF+R+ Sbjct: 700 KVEFLRS 706>XP_005257995 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 DF ++F +N Sbjct: 766 DFAIQFNKN 774>XP_005257994 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 DF ++F +N Sbjct: 766 DFAIQFNKN 774>XP_005266395 Length = 4588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEFMRN 9 VEF+RN Sbjct: 3592 VEFLRN 3597>XP_005263274 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DFKVEFM 7 DFK EF+ Sbjct: 66 DFKFEFI 72>XP_005263272 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DFKVEFM 7 DFK EF+ Sbjct: 66 DFKFEFI 72>XP_005263271 Length = 762 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DFKVEFM 7 DFK EF+ Sbjct: 66 DFKFEFI 72>XP_005271253 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEFMRN 9 V+FMRN Sbjct: 195 VDFMRN 200>XP_005271252 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEFMRN 9 V+FMRN Sbjct: 237 VDFMRN 242>XP_005271251 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 VEFMRN 9 V+FMRN Sbjct: 238 VDFMRN 243>NP_001273 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 DF ++F +N Sbjct: 752 DFAIQFNKN 760>NP_001025177 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DFKVEFMRN 9 DF ++F +N Sbjct: 766 DFAIQFNKN 774Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.147 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 419,710 Number of extensions: 713 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |