Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004324                                                              19     665
NP_002871                                                              19     665
XP_005250103                                                           19     665
XP_005250102                                                           19     665
XP_005265416                                                           19     665
XP_005265415                                                           19     665
XP_005265414                                                           19     665
XP_005265412                                                           19     665
NP_005021                                                              18    1135
NP_001243125                                                           18    1482
NP_001645                                                              18    1482
XP_006724592                                                           18    1482
NP_055079                                                              17    3301
NP_001177728                                                           17    3301
NP_001177730                                                           17    3301
XP_006714134                                                           17    3301
XP_005262758                                                           17    3301
NP_001265                                                              17    4312
NP_001231775                                                           17    4312
NP_001107593                                                           17    4312
NP_001107594                                                           17    4312
NP_001035351                                                           17    4312
NP_001035350                                                           17    4312
NP_001013725                                                           17    4312
NP_001182345                                                           17    4312
NP_004725                                                              17    4312
NP_001182344                                                           17    4312
XP_005254450                                                           17    4312
XP_005254449                                                           17    4312
XP_006719956                                                           17    4312
XP_005266649                                                           17    4312
XP_006718822                                                           17    4312
XP_005262843                                                           17    4312
XP_005262842                                                           17    4312
NP_001138501                                                           16    5631
XP_006722388                                                           16    5631
XP_005252323                                                           16    7355
XP_005252322                                                           16    7355
XP_005252321                                                           16    7355
XP_005252320                                                           16    7355
NP_001092272                                                           16    7355
NP_115547                                                              16    7355
NP_115763                                                              15    9605
NP_055638                                                              15    9605
NP_998820                                                              15    9605
NP_001171914                                                           15    9605
NP_061852                                                              15    9605
NP_001269323                                                           15    9605
NP_006639                                                              15    9605
XP_006722083                                                           15    9605
XP_005257654                                                           15    9605
XP_005257653                                                           15    9605
XP_005257652                                                           15    9605
XP_006719067                                                           15    9605
XP_006719066                                                           15    9605
XP_005253798                                                           15    9605
XP_005253797                                                           15    9605
XP_005253796                                                           15    9605
XP_006719065                                                           15    9605
XP_006719064                                                           15    9605
XP_006719063                                                           15    9605
XP_006719062                                                           15    9605
XP_005253795                                                           15    9605
XP_005253794                                                           15    9605
XP_005253793                                                           15    9605
XP_005253792                                                           15    9605
XP_006719061                                                           15    9605
XP_005253791                                                           15    9605
XP_006717303                                                           15    9605
XP_006717302                                                           15    9605
XP_005252201                                                           15    9605
XP_005252200                                                           15    9605
XP_006717301                                                           15    9605
XP_005252199                                                           15    9605
XP_005252198                                                           15    9605
XP_005252197                                                           15    9605
XP_006717300                                                           15    9605
XP_005252196                                                           15    9605
XP_005252195                                                           15    9605
XP_005252194                                                           15    9605
>NP_004324
          Length = 766

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT KS
Sbjct: 594 DFGLATVKS 602
>NP_002871
          Length = 648

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT KS
Sbjct: 486 DFGLATVKS 494
>XP_005250103
          Length = 758

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT KS
Sbjct: 594 DFGLATVKS 602
>XP_005250102
          Length = 767

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT KS
Sbjct: 594 DFGLATVKS 602
>XP_005265416
          Length = 534

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT KS
Sbjct: 372 DFGLATVKS 380
>XP_005265415
          Length = 567

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT KS
Sbjct: 405 DFGLATVKS 413
>XP_005265414
          Length = 615

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT KS
Sbjct: 453 DFGLATVKS 461
>XP_005265412
          Length = 648

 Score = 19.2 bits (38), Expect =   665
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT KS
Sbjct: 486 DFGLATVKS 494
>NP_005021
          Length = 603

 Score = 18.5 bits (36), Expect =  1135
 Identities = 7/7 (100%), Positives = 7/7 (100%)

Query: 1   DFGLATK 7
           DFGLATK
Sbjct: 194 DFGLATK 200
>NP_001243125
          Length = 609

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT K+
Sbjct: 450 DFGLATVKT 458
>NP_001645
          Length = 606

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT K+
Sbjct: 447 DFGLATVKT 455
>XP_006724592
          Length = 611

 Score = 18.1 bits (35), Expect =  1482
 Identities = 7/9 (77%), Positives = 8/9 (88%)

Query: 1   DFGLATKKS 9
           DFGLAT K+
Sbjct: 452 DFGLATVKT 460
>NP_055079
          Length = 970

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DFGLATK 7
           DFGLAT+
Sbjct: 154 DFGLATQ 160
>NP_001177728
          Length = 938

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DFGLATK 7
           DFGLAT+
Sbjct: 122 DFGLATQ 128
>NP_001177730
          Length = 929

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DFGLATK 7
           DFGLAT+
Sbjct: 113 DFGLATQ 119
>XP_006714134
          Length = 923

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DFGLATK 7
           DFGLAT+
Sbjct: 107 DFGLATQ 113
>XP_005262758
          Length = 936

 Score = 16.9 bits (32), Expect =  3301
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 1   DFGLATK 7
           DFGLAT+
Sbjct: 154 DFGLATQ 160
>NP_001265
          Length = 476

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 148 DFGLAT 153
>NP_001231775
          Length = 442

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 148 DFGLAT 153
>NP_001107593
          Length = 476

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 148 DFGLAT 153
>NP_001107594
          Length = 476

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 148 DFGLAT 153
>NP_001035351
          Length = 783

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 554 DFGLAT 559
>NP_001035350
          Length = 766

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 537 DFGLAT 542
>NP_001013725
          Length = 1649

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 866 DFGLAT 871
>NP_001182345
          Length = 433

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 226 DFGLAT 231
>NP_004725
          Length = 729

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 533 DFGLAT 538
>NP_001182344
          Length = 422

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 226 DFGLAT 231
>XP_005254450
          Length = 1505

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 866 DFGLAT 871
>XP_005254449
          Length = 1626

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 866 DFGLAT 871
>XP_006719956
          Length = 740

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 533 DFGLAT 538
>XP_005266649
          Length = 740

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 533 DFGLAT 538
>XP_006718822
          Length = 476

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 148 DFGLAT 153
>XP_005262843
          Length = 765

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 536 DFGLAT 541
>XP_005262842
          Length = 782

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1   DFGLAT 6
           DFGLAT
Sbjct: 553 DFGLAT 558
>NP_001138501
          Length = 1392

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   DFGLATK 7
           DF LATK
Sbjct: 437 DFNLATK 443
>XP_006722388
          Length = 1511

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   DFGLATK 7
           DF LATK
Sbjct: 437 DFNLATK 443
>XP_005252323
          Length = 635

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   GLATKK 8
           GLATKK
Sbjct: 271 GLATKK 276
>XP_005252322
          Length = 690

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   GLATKK 8
           GLATKK
Sbjct: 358 GLATKK 363
>XP_005252321
          Length = 696

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   GLATKK 8
           GLATKK
Sbjct: 358 GLATKK 363
>XP_005252320
          Length = 706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   GLATKK 8
           GLATKK
Sbjct: 358 GLATKK 363
>NP_001092272
          Length = 722

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   GLATKK 8
           GLATKK
Sbjct: 358 GLATKK 363
>NP_115547
          Length = 706

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 3   GLATKK 8
           GLATKK
Sbjct: 358 GLATKK 363
>NP_115763
          Length = 1243

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 321 DLGLATLK 328
>NP_055638
          Length = 2134

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>NP_998820
          Length = 2634

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>NP_001171914
          Length = 2642

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>NP_061852
          Length = 2382

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>NP_001269323
          Length = 2297

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>NP_006639
          Length = 2217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_006722083
          Length = 1233

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 321 DLGLATLK 328
>XP_005257654
          Length = 1237

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 321 DLGLATLK 328
>XP_005257653
          Length = 1242

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 321 DLGLATLK 328
>XP_005257652
          Length = 1279

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 321 DLGLATLK 328
>XP_006719067
          Length = 2228

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_006719066
          Length = 2381

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_005253798
          Length = 2145

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_005253797
          Length = 2146

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_005253796
          Length = 2173

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_006719065
          Length = 2174

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_006719064
          Length = 2229

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_006719063
          Length = 2266

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_006719062
          Length = 2267

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_005253795
          Length = 2280

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_005253794
          Length = 2391

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_005253793
          Length = 2392

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_005253792
          Length = 2419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_006719061
          Length = 2419

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_005253791
          Length = 2420

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 368 DLGLATLK 375
>XP_006717303
          Length = 1391

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_006717302
          Length = 2148

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_005252201
          Length = 2185

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_005252200
          Length = 2208

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_006717301
          Length = 2212

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_005252199
          Length = 2215

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_005252198
          Length = 2217

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_005252197
          Length = 2224

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_006717300
          Length = 2227

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_005252196
          Length = 2242

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_005252195
          Length = 2259

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
>XP_005252194
          Length = 2260

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   DFGLATKK 8
           D GLAT K
Sbjct: 342 DLGLATLK 349
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.311    0.129    0.347 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 420,673
Number of extensions: 607
Number of successful extensions: 80
Number of sequences better than 10000.0: 80
Number of HSP's gapped: 80
Number of HSP's successfully gapped: 80
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.5 bits)
S2: 28 (15.4 bits)

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