Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 19 665 XP_005262424 19 665 NP_000192 17 3301 NP_891548 16 7355 NP_001129627 16 7355 NP_001129626 16 7355 NP_001278320 16 7355 NP_001230361 16 7355 NP_001230357 16 7355 NP_056141 16 7355 NP_001164108 16 7355 XP_005277572 16 7355 XP_005277571 16 7355 XP_006711310 16 7355 XP_005277570 16 7355 XP_005277569 16 7355 XP_006711309 16 7355 XP_005277568 16 7355 XP_005277567 16 7355 NP_000262 15 9605 NP_078966 15 9605 NP_006807 15 9605 NP_057490 15 9605 XP_006722542 15 9605 XP_005258336 15 9605 XP_005258335 15 9605 XP_005258334 15 9605 XP_005245311 15 9605>NP_722576 Length = 3080 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 DES QRVTA Sbjct: 872 DESAQRVTA 880>XP_005262424 Length = 2875 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 DES QRVTA Sbjct: 667 DESAQRVTA 675>NP_000192 Length = 532 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DESTQRVT 8 DE TQR+T Sbjct: 282 DEGTQRLT 289>NP_891548 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ESTQRVT 8 E+TQR+T Sbjct: 239 EATQRIT 245>NP_001129627 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ESTQRVT 8 E+TQR+T Sbjct: 147 EATQRIT 153>NP_001129626 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ESTQRVT 8 E+TQR+T Sbjct: 246 EATQRIT 252>NP_001278320 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ESTQRVT 8 E+TQR+T Sbjct: 246 EATQRIT 252>NP_001230361 Length = 317 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ESTQRVT 8 E+TQR+T Sbjct: 246 EATQRIT 252>NP_001230357 Length = 486 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 ESTQRVT 8 E+TQR+T Sbjct: 246 EATQRIT 252>NP_056141 Length = 1071 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 ++STQ VTA Sbjct: 711 EDSTQDVTA 719>NP_001164108 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 ++STQ VTA Sbjct: 710 EDSTQDVTA 718>XP_005277572 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 ++STQ VTA Sbjct: 710 EDSTQDVTA 718>XP_005277571 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 ++STQ VTA Sbjct: 711 EDSTQDVTA 719>XP_006711310 Length = 849 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 ++STQ VTA Sbjct: 711 EDSTQDVTA 719>XP_005277570 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 ++STQ VTA Sbjct: 558 EDSTQDVTA 566>XP_005277569 Length = 918 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 ++STQ VTA Sbjct: 558 EDSTQDVTA 566>XP_006711309 Length = 973 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 ++STQ VTA Sbjct: 711 EDSTQDVTA 719>XP_005277568 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 ++STQ VTA Sbjct: 710 EDSTQDVTA 718>XP_005277567 Length = 1071 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 ++STQ VTA Sbjct: 711 EDSTQDVTA 719>NP_000262 Length = 1278 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DESTQRVTA 9 DES VTA Sbjct: 228 DESVDEVTA 236>NP_078966 Length = 14507 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 STQRVT 8 STQRVT Sbjct: 1172 STQRVT 1177>NP_006807 Length = 356 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DESTQRV 7 DE+T+RV Sbjct: 167 DETTERV 173>NP_057490 Length = 167 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 DE+T+RV + Sbjct: 3 DEATRRVVS 11>XP_006722542 Length = 1273 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DESTQRVTA 9 DES VTA Sbjct: 228 DESVDEVTA 236>XP_005258336 Length = 1286 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DESTQRVTA 9 DES VTA Sbjct: 228 DESVDEVTA 236>XP_005258335 Length = 1295 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DESTQRVTA 9 DES VTA Sbjct: 228 DESVDEVTA 236>XP_005258334 Length = 1303 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DESTQRVTA 9 DES VTA Sbjct: 228 DESVDEVTA 236>XP_005245311 Length = 122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DESTQRVTA 9 DE+T+RV + Sbjct: 3 DEATRRVVS 11Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.294 0.105 0.245 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 400,577 Number of extensions: 690 Number of successful extensions: 28 Number of sequences better than 10000.0: 28 Number of HSP's gapped: 28 Number of HSP's successfully gapped: 28 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |