Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 299 XP_005262424 20 299 XP_006723519 18 1935 XP_006723518 18 1935 XP_006723517 18 1935 NP_149074 17 3301 NP_002227 17 4312 NP_000103 16 7355 NP_061992 16 7355 NP_003861 16 7355 NP_598376 16 7355 NP_839943 16 7355 NP_001080 15 9605 NP_653223 15 9605 NP_003310 15 9605 NP_597676 15 9605 NP_596870 15 9605 NP_001243779 15 9605 NP_596869 15 9605 NP_001240841 15 9605 NP_055988 15 9605 NP_001077086 15 9605 NP_055596 15 9605 XP_005257995 15 9605 XP_005257994 15 9605 XP_006716556 15 9605 XP_006716555 15 9605 XP_006716554 15 9605 XP_005262708 15 9605 XP_005262706 15 9605 XP_006714063 15 9605 XP_005262705 15 9605 XP_006714062 15 9605 XP_005262704 15 9605 XP_005262703 15 9605 XP_006712787 15 9605 XP_006712786 15 9605 NP_001273 15 9605 NP_001025177 15 9605 NP_001254479 15 9605 NP_597681 15 9605>NP_722576 Length = 3080 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DEISMTLTH 9 DEISM LTH Sbjct: 2504 DEISMNLTH 2512>XP_005262424 Length = 2875 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DEISMTLTH 9 DEISM LTH Sbjct: 2299 DEISMNLTH 2307>XP_006723519 Length = 223 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DEISMTLTH 9 D +SMT TH Sbjct: 182 DTLSMTFTH 190>XP_006723518 Length = 277 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DEISMTLTH 9 D +SMT TH Sbjct: 236 DTLSMTFTH 244>XP_006723517 Length = 327 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DEISMTLTH 9 D +SMT TH Sbjct: 286 DTLSMTFTH 294>NP_149074 Length = 268 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DEISMTLTH 9 DE+++TL H Sbjct: 56 DEVTITLPH 64>NP_002227 Length = 494 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ISMTLTH 9 +S+TLTH Sbjct: 268 VSLTLTH 274>NP_000103 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DEISMTLTH 9 DE+S+ L+H Sbjct: 633 DEMSVQLSH 641>NP_061992 Length = 797 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DEISMTLT 8 +E+S+TLT Sbjct: 206 EELSLTLT 213>NP_003861 Length = 1657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EISMTLTH 9 E+S+TLT+ Sbjct: 1360 EVSLTLTN 1367>NP_598376 Length = 717 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DEISMTLTH 9 DE+ +TL H Sbjct: 117 DEMDLTLGH 125>NP_839943 Length = 1631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 EISMTLTH 9 E+S+TLT+ Sbjct: 1341 EVSLTLTN 1348>NP_001080 Length = 1704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DEISMTLTH 9 +E+S TL H Sbjct: 1239 EELSKTLDH 1247>NP_653223 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 EISMTLTH 9 E +MT TH Sbjct: 282 EFNMTATH 289>NP_003310 Length = 26926 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 D++S TLT Sbjct: 2912 DQVSATLT 2919>NP_597676 Length = 27051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 D++S TLT Sbjct: 2912 DQVSATLT 2919>NP_596870 Length = 5604 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 D++S TLT Sbjct: 2958 DQVSATLT 2965>NP_001243779 Length = 34350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 D++S TLT Sbjct: 2958 DQVSATLT 2965>NP_596869 Length = 33423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 D++S TLT Sbjct: 2958 DQVSATLT 2965>NP_001240841 Length = 1159 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DEISMTL 7 DEI MTL Sbjct: 361 DEIMMTL 367>NP_055988 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DEISMTL 7 DEI MTL Sbjct: 361 DEIMMTL 367>NP_001077086 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 DE+S T+T Sbjct: 626 DEMSQTIT 633>NP_055596 Length = 1594 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 DE+S T+T Sbjct: 626 DEMSQTIT 633>XP_005257995 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EISMTLTH 9 EIS T TH Sbjct: 738 EISGTFTH 745>XP_005257994 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EISMTLTH 9 EIS T TH Sbjct: 738 EISGTFTH 745>XP_006716556 Length = 1048 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 DE+S T+T Sbjct: 83 DEMSQTIT 90>XP_006716555 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 DE+S T+T Sbjct: 574 DEMSQTIT 581>XP_006716554 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 DE+S T+T Sbjct: 626 DEMSQTIT 633>XP_005262708 Length = 1039 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DEISMTL 7 DEI MTL Sbjct: 232 DEIMMTL 238>XP_005262706 Length = 1146 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DEISMTL 7 DEI MTL Sbjct: 232 DEIMMTL 238>XP_006714063 Length = 1168 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DEISMTL 7 DEI MTL Sbjct: 361 DEIMMTL 367>XP_005262705 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DEISMTL 7 DEI MTL Sbjct: 361 DEIMMTL 367>XP_006714062 Length = 1262 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DEISMTL 7 DEI MTL Sbjct: 361 DEIMMTL 367>XP_005262704 Length = 1262 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DEISMTL 7 DEI MTL Sbjct: 361 DEIMMTL 367>XP_005262703 Length = 1275 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DEISMTL 7 DEI MTL Sbjct: 361 DEIMMTL 367>XP_006712787 Length = 33978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 D++S TLT Sbjct: 2959 DQVSATLT 2966>XP_006712786 Length = 35484 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 D++S TLT Sbjct: 2959 DQVSATLT 2966>NP_001273 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EISMTLTH 9 EIS T TH Sbjct: 724 EISGTFTH 731>NP_001025177 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 EISMTLTH 9 EIS T TH Sbjct: 738 EISGTFTH 745>NP_001254479 Length = 35991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 D++S TLT Sbjct: 2958 DQVSATLT 2965>NP_597681 Length = 27118 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEISMTLT 8 D++S TLT Sbjct: 2912 DQVSATLT 2919Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.122 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 407,267 Number of extensions: 897 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |