Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001243398 21 229 NP_036462 21 229 NP_001243397 21 229 XP_005269721 21 229 NP_000386 18 1935 XP_005261397 18 1935 NP_000085 17 2528 NP_003820 17 2528 NP_001248335 17 2528 NP_001248336 17 2528 XP_005251680 17 2528 XP_006716954 17 2528 XP_006716953 17 2528 XP_006716952 17 2528 XP_006716951 17 2528 XP_006716950 17 2528 XP_006716949 17 2528 XP_006716948 17 2528 XP_005251679 17 2528 NP_005090 17 4312 NP_001230675 17 4312 NP_060035 17 4312 XP_006722023 17 4312 XP_006722022 17 4312 XP_006722021 17 4312 XP_006711698 17 4312 NP_005535 16 5631 XP_006712575 16 5631 XP_005246591 16 5631 NP_620686 16 7355 XP_005271476 16 7355 XP_006718836 16 7355 NP_008919 15 9605 NP_001153059 15 9605 NP_001153060 15 9605 NP_598000 15 9605 NP_064608 15 9605 NP_001157968 15 9605 XP_005249871 15 9605 XP_005248716 15 9605 XP_006713762 15 9605 XP_006713759 15 9605 NP_060808 15 9605>NP_001243398 Length = 1781 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DEGSMSAFT 9 DEGSM+AFT Sbjct: 359 DEGSMNAFT 367>NP_036462 Length = 2073 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DEGSMSAFT 9 DEGSM+AFT Sbjct: 359 DEGSMNAFT 367>NP_001243397 Length = 1890 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DEGSMSAFT 9 DEGSM+AFT Sbjct: 359 DEGSMNAFT 367>XP_005269721 Length = 2073 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DEGSMSAFT 9 DEGSM+AFT Sbjct: 359 DEGSMNAFT 367>NP_000386 Length = 897 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GSMSAFT 9 GSMSAFT Sbjct: 498 GSMSAFT 504>XP_005261397 Length = 903 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 GSMSAFT 9 GSMSAFT Sbjct: 504 GSMSAFT 510>NP_000085 Length = 2944 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DEGSMSAFT 9 DEGS +A+T Sbjct: 2881 DEGSCTAYT 2889>NP_003820 Length = 2041 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1796 EGSLSSFT 1803>NP_001248335 Length = 2037 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1792 EGSLSSFT 1799>NP_001248336 Length = 2008 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1763 EGSLSSFT 1770>XP_005251680 Length = 2000 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1755 EGSLSSFT 1762>XP_006716954 Length = 2008 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1763 EGSLSSFT 1770>XP_006716953 Length = 2031 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1786 EGSLSSFT 1793>XP_006716952 Length = 2037 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1792 EGSLSSFT 1799>XP_006716951 Length = 2041 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1796 EGSLSSFT 1803>XP_006716950 Length = 2070 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1825 EGSLSSFT 1832>XP_006716949 Length = 2070 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1825 EGSLSSFT 1832>XP_006716948 Length = 2070 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1825 EGSLSSFT 1832>XP_005251679 Length = 2070 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 EGSMSAFT 9 EGS+S+FT Sbjct: 1825 EGSLSSFT 1832>NP_005090 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DEGSMSAFT 9 D+G SAFT Sbjct: 350 DDGLQSAFT 358>NP_001230675 Length = 403 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS+SAF Sbjct: 199 EGSLSAF 205>NP_060035 Length = 541 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS+SAF Sbjct: 337 EGSLSAF 343>XP_006722023 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS+SAF Sbjct: 337 EGSLSAF 343>XP_006722022 Length = 403 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS+SAF Sbjct: 199 EGSLSAF 205>XP_006722021 Length = 418 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS+SAF Sbjct: 337 EGSLSAF 343>XP_006711698 Length = 846 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DEGSMSAFT 9 D+G SAFT Sbjct: 350 DDGLQSAFT 358>NP_005535 Length = 1242 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GSMSAFT 9 G MSAFT Sbjct: 1067 GGMSAFT 1073>XP_006712575 Length = 1242 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GSMSAFT 9 G MSAFT Sbjct: 1067 GGMSAFT 1073>XP_005246591 Length = 1242 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 GSMSAFT 9 G MSAFT Sbjct: 1067 GGMSAFT 1073>NP_620686 Length = 950 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DEGSMSAFT 9 D+G SAFT Sbjct: 350 DDGLPSAFT 358>XP_005271476 Length = 619 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DEGSMSAFT 9 D+G SAFT Sbjct: 19 DDGLPSAFT 27>XP_006718836 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DEGSMSAFT 9 D+G SAFT Sbjct: 42 DDGLPSAFT 50>NP_008919 Length = 967 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DEGSMSAFT 9 D+G +AFT Sbjct: 390 DDGLQAAFT 398>NP_001153059 Length = 1428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEGSMSAF 8 ++GS SAF Sbjct: 970 EDGSFSAF 977>NP_001153060 Length = 1368 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEGSMSAF 8 ++GS SAF Sbjct: 893 EDGSFSAF 900>NP_598000 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEGSMSAF 8 ++GS SAF Sbjct: 970 EDGSFSAF 977>NP_064608 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS++AF Sbjct: 385 EGSLAAF 391>NP_001157968 Length = 1854 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS+S+F Sbjct: 69 EGSLSSF 75>XP_005249871 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS++AF Sbjct: 53 EGSLAAF 59>XP_005248716 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DEGSMSAF 8 ++GS SAF Sbjct: 970 EDGSFSAF 977>XP_006713762 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS+S+F Sbjct: 113 EGSLSSF 119>XP_006713759 Length = 1898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS+S+F Sbjct: 113 EGSLSSF 119>NP_060808 Length = 982 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 EGSMSAF 8 EGS+S+F Sbjct: 69 EGSLSSF 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.304 0.116 0.303 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 497,274 Number of extensions: 773 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |