Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 19 869 NP_001276866 18 1135 NP_004439 18 1135 NP_001276865 18 1135 NP_001005862 18 1135 XP_005257197 18 1135 XP_006721828 18 1135 NP_789786 17 4312 XP_005276824 17 4312 XP_005276823 17 4312 XP_005276822 17 4312 XP_006726278 17 4312 XP_005276821 17 4312 XP_006726277 17 4312 XP_005276820 17 4312 XP_005276819 17 4312 XP_005276818 17 4312 XP_005248564 17 4312 XP_005248520 17 4312 XP_005248519 17 4312 XP_005248518 17 4312 XP_006714633 17 4312 XP_005248517 17 4312 XP_006714632 17 4312 XP_005248516 17 4312 XP_005248515 17 4312 XP_005248514 17 4312 NP_005900 17 4312 NP_659488 15 9605 NP_001768 15 9605 NP_942088 15 9605 XP_006717015 15 9605 XP_005247966 15 9605 XP_005247965 15 9605>NP_005219 Length = 1210 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DEAYVMAVV 9 DEAYVMA V Sbjct: 761 DEAYVMASV 769>NP_001276866 Length = 1055 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DEAYVMAVV 9 DEAYVMA V Sbjct: 769 DEAYVMAGV 777>NP_004439 Length = 1255 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DEAYVMAVV 9 DEAYVMA V Sbjct: 769 DEAYVMAGV 777>NP_001276865 Length = 1240 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DEAYVMAVV 9 DEAYVMA V Sbjct: 754 DEAYVMAGV 762>NP_001005862 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DEAYVMAVV 9 DEAYVMA V Sbjct: 739 DEAYVMAGV 747>XP_005257197 Length = 1225 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DEAYVMAVV 9 DEAYVMA V Sbjct: 739 DEAYVMAGV 747>XP_006721828 Length = 1336 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DEAYVMAVV 9 DEAYVMA V Sbjct: 850 DEAYVMAGV 858>NP_789786 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 317 EEAYVMA 323>XP_005276824 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 192 EEAYVMA 198>XP_005276823 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 192 EEAYVMA 198>XP_005276822 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 227 EEAYVMA 233>XP_006726278 Length = 434 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 240 EEAYVMA 246>XP_005276821 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 244 EEAYVMA 250>XP_006726277 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 312 EEAYVMA 318>XP_005276820 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 316 EEAYVMA 322>XP_005276819 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 317 EEAYVMA 323>XP_005276818 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 317 EEAYVMA 323>XP_005248564 Length = 2342 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAYVMAVV 9 E YVMAVV Sbjct: 916 EDYVMAVV 923>XP_005248520 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 192 EEAYVMA 198>XP_005248519 Length = 386 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 192 EEAYVMA 198>XP_005248518 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 227 EEAYVMA 233>XP_006714633 Length = 434 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 240 EEAYVMA 246>XP_005248517 Length = 438 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 244 EEAYVMA 250>XP_006714632 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 312 EEAYVMA 318>XP_005248516 Length = 510 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 316 EEAYVMA 322>XP_005248515 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 317 EEAYVMA 323>XP_005248514 Length = 511 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 DEAYVMA 7 +EAYVMA Sbjct: 317 EEAYVMA 323>NP_005900 Length = 2468 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 EAYVMAVV 9 E YVMAVV Sbjct: 1042 EDYVMAVV 1049>NP_659488 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYVMAVV 9 AY+MAV+ Sbjct: 164 AYLMAVI 170>NP_001768 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYVMAVV 9 AY++AVV Sbjct: 248 AYILAVV 254>NP_942088 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYVMAVV 9 AY++AVV Sbjct: 248 AYILAVV 254>XP_006717015 Length = 192 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYVMAVV 9 AY+MAV+ Sbjct: 164 AYLMAVI 170>XP_005247966 Length = 293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYVMAVV 9 AY++AVV Sbjct: 248 AYILAVV 254>XP_005247965 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 AYVMAVV 9 AY++AVV Sbjct: 248 AYILAVV 254Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.130 0.336 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 340,596 Number of extensions: 353 Number of successful extensions: 34 Number of sequences better than 10000.0: 34 Number of HSP's gapped: 34 Number of HSP's successfully gapped: 34 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |