Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_001269889 17 3301 NP_001269888 17 3301 NP_060707 17 3301 NP_001191230 17 4312 NP_001191232 17 4312 NP_001129488 17 4312 NP_001191231 17 4312 NP_001129603 17 4312 NP_958817 17 4312 NP_001129602 17 4312 NP_001129601 17 4312 NP_958816 17 4312 NP_000475 17 4312 NP_001177645 16 7355 NP_001275668 16 7355 NP_004399 16 7355 NP_001275667 16 7355 NP_001005336 16 7355 NP_001275666 16 7355 NP_004936 16 7355 NP_001005361 16 7355 NP_001005360 16 7355 NP_001005362 16 7355 NP_056384 16 7355 NP_001129599 16 7355 NP_001265181 16 7355 NP_001253989 16 7355 NP_775267 16 7355 NP_775268 16 7355 NP_001253990 16 7355 NP_001253988 16 7355 NP_055563 16 7355 NP_001018100 16 7355 NP_001272829 16 7355 NP_001018112 16 7355 NP_937886 16 7355 NP_775266 16 7355 NP_004094 16 7355 NP_056347 16 7355 XP_006717057 16 7355 XP_006717056 16 7355 XP_005251826 16 7355 XP_005251825 16 7355 XP_005251821 16 7355 XP_005251820 16 7355 XP_006717055 16 7355 XP_005273505 16 7355 XP_005273504 16 7355 XP_006711331 16 7355 XP_005245141 16 7355 XP_005245139 16 7355 XP_005245138 16 7355 XP_005245137 16 7355 XP_005245136 16 7355 NP_078984 16 7355 NP_689596 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DDVLANRLL 9 D+VLANRLL Sbjct: 2208 DEVLANRLL 2216Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 DDVLANR 7 DD++ NR Sbjct: 3180 DDIITNR 3186>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 DDVLANRLL 9 D+VLANRLL Sbjct: 2208 DEVLANRLL 2216Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 DDVLANR 7 DD++ NR Sbjct: 3180 DDIITNR 3186>NP_001269889 Length = 1135 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDVLANRLL 9 +D+L NRLL Sbjct: 982 EDMLGNRLL 990>NP_001269888 Length = 1135 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDVLANRLL 9 +D+L NRLL Sbjct: 982 EDMLGNRLL 990>NP_060707 Length = 1150 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDVLANRLL 9 +D+L NRLL Sbjct: 997 EDMLGNRLL 1005>NP_001191230 Length = 752 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDVLAN + Sbjct: 574 DDVLANMI 581>NP_001191232 Length = 677 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDVLAN + Sbjct: 499 DDVLANMI 506>NP_001129488 Length = 746 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDVLAN + Sbjct: 550 DDVLANMI 557>NP_001191231 Length = 733 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDVLAN + Sbjct: 555 DDVLANMI 562>NP_001129603 Length = 660 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDVLAN + Sbjct: 464 DDVLANMI 471>NP_958817 Length = 695 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDVLAN + Sbjct: 499 DDVLANMI 506>NP_001129602 Length = 714 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDVLAN + Sbjct: 518 DDVLANMI 525>NP_001129601 Length = 639 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDVLAN + Sbjct: 443 DDVLANMI 450>NP_958816 Length = 751 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDVLAN + Sbjct: 555 DDVLANMI 562>NP_000475 Length = 770 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDVLAN + Sbjct: 574 DDVLANMI 581>NP_001177645 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_001275668 Length = 864 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_004399 Length = 864 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_001275667 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_001005336 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_001275666 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_004936 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_001005361 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_001005360 Length = 870 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_001005362 Length = 866 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_056384 Length = 863 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_001129599 Length = 859 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_001265181 Length = 555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_001253989 Length = 445 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDV+ NR+ Sbjct: 187 DDVMENRV 194>NP_775267 Length = 967 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DDVLANRLL 9 +DV+ NR+L Sbjct: 423 EDVVLNRIL 431>NP_775268 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DDVLANRLL 9 +DV+ NR+L Sbjct: 423 EDVVLNRIL 431>NP_001253990 Length = 450 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDV+ NR+ Sbjct: 192 DDVMENRV 199>NP_001253988 Length = 458 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDV+ NR+ Sbjct: 200 DDVMENRV 207>NP_055563 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DDVLANRL 8 DDV+ NR+ Sbjct: 212 DDVMENRV 219>NP_001018100 Length = 550 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDVLANRLL 9 DD+ A RLL Sbjct: 468 DDITAARLL 476>NP_001272829 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDVLANRLL 9 DD+ A RLL Sbjct: 683 DDITAARLL 691>NP_001018112 Length = 211 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDVLANRLL 9 DD+ A RLL Sbjct: 129 DDITAARLL 137>NP_937886 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDVLANRLL 9 DDVL R+L Sbjct: 225 DDVLCARML 233>NP_775266 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DDVLANRLL 9 +DV+ NR+L Sbjct: 423 EDVVLNRIL 431>NP_004094 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DDVLANRLL 9 +DV+ NR+L Sbjct: 423 EDVVLNRIL 431>NP_056347 Length = 368 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDVLANRLL 9 DD+ A RLL Sbjct: 286 DDITAARLL 294>XP_006717057 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_006717056 Length = 498 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_005251826 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_005251825 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_005251821 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_005251820 Length = 868 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_006717055 Length = 868 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_005273505 Length = 997 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DDVLANRLL 9 +DV+ NR+L Sbjct: 423 EDVVLNRIL 431>XP_005273504 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DDVLANRLL 9 +DV+ NR+L Sbjct: 423 EDVVLNRIL 431>XP_006711331 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_005245141 Length = 608 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_005245139 Length = 763 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 108 DVLENKLL 115>XP_005245138 Length = 862 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_005245137 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>XP_005245136 Length = 873 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL N+LL Sbjct: 218 DVLENKLL 225>NP_078984 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDVLANRLL 9 DDVL R+L Sbjct: 225 DDVLCARML 233>NP_689596 Length = 885 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DVLANRLL 9 DVL +RLL Sbjct: 708 DVLVHRLL 715Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.147 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 387,113 Number of extensions: 455 Number of successful extensions: 60 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 60 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |