Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005581 18 1135 NP_005582 18 1135 XP_006718905 18 1135 XP_005274064 18 1135 NP_208325 18 1482 XP_005251379 18 1482 XP_005251378 18 1482 XP_005251377 18 1482 XP_005251376 18 1482 XP_005251375 18 1482 XP_005251374 18 1482 NP_085134 17 3301 NP_001164641 17 3301 NP_001186020 17 3301 NP_001186014 17 3301 NP_775804 17 3301 NP_001186018 17 3301 XP_005244992 17 3301 XP_006711258 17 3301 XP_005244991 17 3301 NP_443142 17 4312 NP_001268432 17 4312 NP_001165783 17 4312 NP_002661 17 4312 NP_001138791 17 4312 XP_006713725 17 4312 XP_006713724 17 4312 XP_006713723 17 4312 NP_001020272 16 5631 NP_001020271 16 5631 NP_060695 16 5631 NP_002262 16 5631 XP_005266756 16 5631 XP_005254110 16 5631 XP_005254109 16 5631 XP_005254106 16 5631 XP_005251560 16 5631 NP_997320 16 7355 NP_078976 16 7355 NP_078832 16 7355 NP_079229 16 7355 NP_004740 16 7355 NP_112162 16 7355 NP_954573 16 7355 NP_619636 16 7355 NP_001248763 16 7355 XP_005253995 16 7355 XP_006719669 16 7355 XP_005253612 16 7355 XP_005271723 16 7355 XP_005271722 16 7355 XP_005274106 16 7355 XP_005274105 16 7355 NP_001071639 16 7355 NP_056969 16 7355 NP_060599 15 9605 NP_001138633 15 9605 XP_006723847 15 9605 XP_005257557 15 9605 XP_005248304 15 9605 NP_004966 15 9605>NP_005581 Length = 680 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DDNTFKSLV 9 D+NTFK LV Sbjct: 9 DENTFKILV 17>NP_005582 Length = 708 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DDNTFKSLV 9 D+NTFK LV Sbjct: 9 DENTFKILV 17>XP_006718905 Length = 707 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DDNTFKSLV 9 D+NTFK LV Sbjct: 9 DENTFKILV 17>XP_005274064 Length = 708 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 DDNTFKSLV 9 D+NTFK LV Sbjct: 9 DENTFKILV 17>NP_208325 Length = 1032 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DDNTFKSLV 9 +DNT++SLV Sbjct: 419 EDNTYQSLV 427>XP_005251379 Length = 653 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DDNTFKSLV 9 +DNT++SLV Sbjct: 40 EDNTYQSLV 48>XP_005251378 Length = 659 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DDNTFKSLV 9 +DNT++SLV Sbjct: 46 EDNTYQSLV 54>XP_005251377 Length = 733 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DDNTFKSLV 9 +DNT++SLV Sbjct: 120 EDNTYQSLV 128>XP_005251376 Length = 733 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DDNTFKSLV 9 +DNT++SLV Sbjct: 120 EDNTYQSLV 128>XP_005251375 Length = 939 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DDNTFKSLV 9 +DNT++SLV Sbjct: 326 EDNTYQSLV 334>XP_005251374 Length = 970 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 DDNTFKSLV 9 +DNT++SLV Sbjct: 419 EDNTYQSLV 427>NP_085134 Length = 299 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDNTFKSLV 9 D N++KSLV Sbjct: 49 DPNSYKSLV 57>NP_001164641 Length = 298 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDNTFKSLV 9 D N++KSLV Sbjct: 49 DPNSYKSLV 57>NP_001186020 Length = 981 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DNTFKSLV 9 +NTFKS++ Sbjct: 279 ENTFKSVI 286>NP_001186014 Length = 1035 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DNTFKSLV 9 +NTFKS++ Sbjct: 279 ENTFKSVI 286>NP_775804 Length = 981 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DNTFKSLV 9 +NTFKS++ Sbjct: 279 ENTFKSVI 286>NP_001186018 Length = 1035 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DNTFKSLV 9 +NTFKS++ Sbjct: 279 ENTFKSVI 286>XP_005244992 Length = 1035 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DNTFKSLV 9 +NTFKS++ Sbjct: 279 ENTFKSVI 286>XP_006711258 Length = 1035 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DNTFKSLV 9 +NTFKS++ Sbjct: 279 ENTFKSVI 286>XP_005244991 Length = 1035 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DNTFKSLV 9 +NTFKS++ Sbjct: 279 ENTFKSVI 286>NP_443142 Length = 696 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DDNTFKSLV 9 ++NTFK+L+ Sbjct: 415 ENNTFKNLL 423>NP_001268432 Length = 696 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DDNTFKSLV 9 ++NTFK+L+ Sbjct: 415 ENNTFKNLL 423>NP_001165783 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 DD+ FKSL Sbjct: 152 DDSLFKSL 159>NP_002661 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 DD+ FKSL Sbjct: 152 DDSLFKSL 159>NP_001138791 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 DD+ FKSL Sbjct: 152 DDSLFKSL 159>XP_006713725 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 DD+ FKSL Sbjct: 152 DDSLFKSL 159>XP_006713724 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 DD+ FKSL Sbjct: 152 DDSLFKSL 159>XP_006713723 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 DD+ FKSL Sbjct: 152 DDSLFKSL 159>NP_001020272 Length = 304 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DDNTFK 6 +DNTFK Sbjct: 103 EDNTFK 108>NP_001020271 Length = 197 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DDNTFK 6 +DNTFK Sbjct: 103 EDNTFK 108>NP_060695 Length = 513 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NTFKSL 8 NTFKSL Sbjct: 385 NTFKSL 390>NP_002262 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDNTFKSLV 9 DD+ KSLV Sbjct: 251 DDSVLKSLV 259>XP_005266756 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 DDNTFK 6 +DNTFK Sbjct: 103 EDNTFK 108>XP_005254110 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDNTFKSLV 9 DD+ KSLV Sbjct: 251 DDSVLKSLV 259>XP_005254109 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDNTFKSLV 9 DD+ KSLV Sbjct: 251 DDSVLKSLV 259>XP_005254106 Length = 1115 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDNTFKSLV 9 DD+ KSLV Sbjct: 251 DDSVLKSLV 259>XP_005251560 Length = 462 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 NTFKSL 8 NTFKSL Sbjct: 334 NTFKSL 339>NP_997320 Length = 4471 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 DDNTF 5 DDNTF Sbjct: 1438 DDNTF 1442>NP_078976 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DDNTFKSLV 9 D NTF+ +V Sbjct: 235 DTNTFRGVV 243>NP_078832 Length = 351 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 DD TF++L Sbjct: 254 DDTTFQAL 261>NP_079229 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DNTFKSLV 9 +N+FKSL+ Sbjct: 802 ENSFKSLL 809>NP_004740 Length = 631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DDNTFKSLV 9 D NTF+ L+ Sbjct: 447 DQNTFQKLL 455>NP_112162 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DDNTFKSLV 9 D NTF+ L+ Sbjct: 337 DQNTFQKLL 345>NP_954573 Length = 521 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DDNTFKSLV 9 D NTF+ L+ Sbjct: 337 DQNTFQKLL 345>NP_619636 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 DDNTF 5 DDNTF Sbjct: 307 DDNTF 311>NP_001248763 Length = 642 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DDNTFKSLV 9 D NTF+ L+ Sbjct: 458 DQNTFQKLL 466>XP_005253995 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DNTFKSLV 9 +N+FKSL+ Sbjct: 666 ENSFKSLL 673>XP_006719669 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DNTFKSLV 9 +N+FKSL+ Sbjct: 774 ENSFKSLL 781>XP_005253612 Length = 4589 Score = 15.8 bits (29), Expect = 7355 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 1 DDNTF 5 DDNTF Sbjct: 1556 DDNTF 1560>XP_005271723 Length = 331 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 DD TF++L Sbjct: 254 DDTTFQAL 261>XP_005271722 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 DD TF++L Sbjct: 254 DDTTFQAL 261>XP_005274106 Length = 1685 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 D+NT KSL Sbjct: 108 DENTRKSL 115>XP_005274105 Length = 1686 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 D+NT KSL Sbjct: 108 DENTRKSL 115>NP_001071639 Length = 113 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DDNTFKS 7 D+NTF S Sbjct: 54 DENTFSS 60>NP_056969 Length = 1555 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DDNTFKSL 8 D+NT KSL Sbjct: 108 DENTRKSL 115>NP_060599 Length = 261 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DDNTFKSLV 9 D N F SLV Sbjct: 122 DSNPFASLV 130>NP_001138633 Length = 161 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TFKSLV 9 TFKSLV Sbjct: 140 TFKSLV 145>XP_006723847 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DDNTFKSL 8 DD FKS+ Sbjct: 357 DDTKFKSI 364>XP_005257557 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 DDNTFKSLV 9 D N F SLV Sbjct: 42 DSNPFASLV 50>XP_005248304 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 TFKSLV 9 TFKSLV Sbjct: 246 TFKSLV 251>NP_004966 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DDNTFKSL 8 DD FKS+ Sbjct: 357 DDTKFKSI 364Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.132 0.356 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 594,214 Number of extensions: 1268 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |