Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000236 19 665 NP_001120972 19 665 XP_006716052 19 665 XP_006716051 19 665 NP_065962 18 1935 NP_115618 18 1935 XP_005250744 18 1935 XP_005250743 18 1935 XP_006716234 18 1935 XP_006713726 18 1935 NP_001099013 18 1935 NP_861440 18 1935 NP_065861 17 4312 XP_005267973 17 4312 XP_006714228 17 4312 XP_006714227 17 4312 XP_006714226 17 4312 XP_006714225 17 4312 XP_006714224 17 4312 XP_006714223 17 4312 XP_006714222 17 4312 XP_006714221 17 4312 XP_006714220 17 4312 NP_001123539 17 4312 NP_056086 17 4312 NP_570118 16 5631 NP_570116 16 5631 NP_001269828 16 5631 NP_001269829 16 5631 NP_001269830 16 5631 NP_001093867 16 5631 NP_008954 16 5631 NP_060009 16 5631 XP_005259315 16 5631 XP_005259314 16 5631 XP_006721125 16 5631 XP_006712269 16 5631 XP_006712268 16 5631 XP_005246303 16 5631 NP_077297 16 5631 NP_000050 16 7355 XP_006714032 16 7355 NP_954868 15 9605 NP_954869 15 9605 NP_001277153 15 9605 NP_954870 15 9605 NP_056516 15 9605 NP_001120869 15 9605 NP_954863 15 9605 NP_002034 15 9605 NP_060829 15 9605 NP_001120870 15 9605 NP_570141 15 9605>NP_000236 Length = 1390 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DDILF VFA Sbjct: 339 DDILFGVFA 347>NP_001120972 Length = 1408 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DDILF VFA Sbjct: 339 DDILFGVFA 347>XP_006716052 Length = 1409 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DDILF VFA Sbjct: 358 DDILFGVFA 366>XP_006716051 Length = 1427 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DDILF VFA Sbjct: 358 DDILFGVFA 366>NP_065962 Length = 1894 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DD+LF VF+ Sbjct: 332 DDLLFTVFS 340>NP_115618 Length = 1896 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 +D+LF VFA Sbjct: 334 EDVLFTVFA 342>XP_005250744 Length = 522 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DD+LF VF+ Sbjct: 332 DDLLFTVFS 340>XP_005250743 Length = 1894 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DD+LF VF+ Sbjct: 332 DDLLFTVFS 340>XP_006716234 Length = 1894 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DD+LF VF+ Sbjct: 332 DDLLFTVFS 340>XP_006713726 Length = 1910 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 +D+LF VFA Sbjct: 352 EDVLFTVFA 360>NP_001099013 Length = 492 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DD+LF VF+ Sbjct: 332 DDLLFTVFS 340>NP_861440 Length = 522 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DD+LF VF+ Sbjct: 332 DDLLFTVFS 340>NP_065861 Length = 509 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DILFRVFA 9 D+LF VFA Sbjct: 300 DVLFDVFA 307>XP_005267973 Length = 537 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DILFRVFA 9 D+LF VFA Sbjct: 328 DVLFDVFA 335>XP_006714228 Length = 623 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 345 DDLIFRV 351>XP_006714227 Length = 623 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 345 DDLIFRV 351>XP_006714226 Length = 629 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 351 DDLIFRV 357>XP_006714225 Length = 748 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 470 DDLIFRV 476>XP_006714224 Length = 748 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 470 DDLIFRV 476>XP_006714223 Length = 748 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 470 DDLIFRV 476>XP_006714222 Length = 766 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 488 DDLIFRV 494>XP_006714221 Length = 774 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 496 DDLIFRV 502>XP_006714220 Length = 775 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 497 DDLIFRV 503>NP_001123539 Length = 744 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 470 DDLIFRV 476>NP_056086 Length = 771 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 DD++FRV Sbjct: 497 DDLIFRV 503>NP_570118 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 +D+LFRV Sbjct: 179 EDVLFRV 185>NP_570116 Length = 382 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DDILFRV 7 +D+LFRV Sbjct: 179 EDVLFRV 185>NP_001269828 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DDILFRVF 8 D++LF+V+ Sbjct: 515 DEVLFKVY 522>NP_001269829 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DDILFRVF 8 D++LF+V+ Sbjct: 497 DEVLFKVY 504>NP_001269830 Length = 791 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DDILFRVF 8 D++LF+V+ Sbjct: 448 DEVLFKVY 455>NP_001093867 Length = 867 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DDILFRVF 8 D++LF+V+ Sbjct: 524 DEVLFKVY 531>NP_008954 Length = 1011 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DDILFRVF 8 D++LF+V+ Sbjct: 668 DEVLFKVY 675>NP_060009 Length = 4116 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DDIL ++F+ Sbjct: 2217 DDILTKIFS 2225>XP_005259315 Length = 451 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDILFRVFA 9 DDIL R F+ Sbjct: 365 DDILARAFS 373>XP_005259314 Length = 473 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDILFRVFA 9 DDIL R F+ Sbjct: 387 DDILARAFS 395>XP_006721125 Length = 4070 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DDILFRVFA 9 DDIL ++F+ Sbjct: 2171 DDILTKIFS 2179>XP_006712269 Length = 838 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DDILFRVF 8 D++LF+V+ Sbjct: 495 DEVLFKVY 502>XP_006712268 Length = 840 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DDILFRVF 8 D++LF+V+ Sbjct: 497 DEVLFKVY 504>XP_005246303 Length = 993 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DDILFRVF 8 D++LF+V+ Sbjct: 650 DEVLFKVY 657>NP_077297 Length = 480 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DDILFRVFA 9 DDIL R F+ Sbjct: 394 DDILARAFS 402>NP_000050 Length = 3418 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DDILFRVF 8 D+ILF+++ Sbjct: 3042 DEILFQIY 3049>XP_006714032 Length = 423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ILFRVFA 9 ILF+VFA Sbjct: 412 ILFQVFA 418>NP_954868 Length = 533 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DILFRVF 8 D+L RVF Sbjct: 122 DVLLRVF 128>NP_954869 Length = 513 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DILFRVF 8 D+L RVF Sbjct: 102 DVLLRVF 108>NP_001277153 Length = 413 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DILFRVF 8 D+L RVF Sbjct: 2 DVLLRVF 8>NP_954870 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DILFRVF 8 D+L RVF Sbjct: 140 DVLLRVF 146>NP_056516 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DDILFRV 7 DDI FRV Sbjct: 39 DDIPFRV 45>NP_001120869 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DDILFRV 7 DDI FRV Sbjct: 39 DDIPFRV 45>NP_954863 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DILFRVF 8 D+L RVF Sbjct: 122 DVLLRVF 128>NP_002034 Length = 465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DDILFRVF 8 D+I+ RVF Sbjct: 154 DNIMLRVF 161>NP_060829 Length = 469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 DILFRV 7 DILFR+ Sbjct: 8 DILFRI 13>NP_001120870 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 DDILFRV 7 DDI FRV Sbjct: 39 DDIPFRV 45>NP_570141 Length = 445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 DILFRVF 8 D+L RVF Sbjct: 85 DVLLRVF 91Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.351 0.166 0.497 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 420,054 Number of extensions: 853 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |