Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 18 1935 NP_000242 18 1935 XP_005264389 18 1935 NP_003356 17 2528 NP_059138 17 4312 NP_071351 16 5631 NP_009114 16 5631 XP_006726572 16 5631 XP_006726571 16 5631 XP_006726570 16 5631 XP_003960511 16 5631 XP_005252817 16 5631 XP_006717414 16 5631 XP_006710283 16 5631 XP_006710282 16 5631 NP_001005289 16 5631 NP_001127951 16 7355 NP_060573 16 7355 XP_006716981 16 7355 XP_006716980 16 7355 XP_005272572 16 7355 XP_005272573 16 7355 XP_005271048 16 7355 NP_149350 16 7355 NP_000285 15 9605 NP_001165903 15 9605 NP_002486 15 9605 NP_689982 15 9605 NP_439896 15 9605 NP_036505 15 9605 XP_006722778 15 9605 XP_005259585 15 9605 XP_006722777 15 9605 XP_005255422 15 9605 XP_006721117 15 9605 XP_005255421 15 9605 XP_005255420 15 9605 XP_006715391 15 9605 NP_001177945 15 9605>NP_001245210 Length = 868 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VSFAHVS 9 VSFAHVS Sbjct: 540 VSFAHVS 546>NP_000242 Length = 934 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VSFAHVS 9 VSFAHVS Sbjct: 606 VSFAHVS 612>XP_005264389 Length = 921 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 VSFAHVS 9 VSFAHVS Sbjct: 606 VSFAHVS 612>NP_003356 Length = 480 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DAVSFAHVS 9 DA+ FAHV+ Sbjct: 280 DALPFAHVA 288>NP_059138 Length = 1032 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VSFAHVS 9 VSFAH+S Sbjct: 349 VSFAHLS 355>NP_071351 Length = 2752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVSFAHVS 9 AVSF H+S Sbjct: 1834 AVSFEHLS 1841>NP_009114 Length = 797 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DAVSFAHVS 9 DA++FA VS Sbjct: 585 DALTFAEVS 593>XP_006726572 Length = 2066 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVSFAHV 8 AVSF HV Sbjct: 1209 AVSFVHV 1215>XP_006726571 Length = 3681 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVSFAHV 8 AVSF HV Sbjct: 2865 AVSFVHV 2871>XP_006726570 Length = 3722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVSFAHV 8 AVSF HV Sbjct: 2865 AVSFVHV 2871>XP_003960511 Length = 3722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVSFAHV 8 AVSF HV Sbjct: 2865 AVSFVHV 2871>XP_005252817 Length = 812 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DAVSFAHVS 9 DA++FA VS Sbjct: 600 DALTFAEVS 608>XP_006717414 Length = 5100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVSFAHV 8 AVSF HV Sbjct: 4243 AVSFVHV 4249>XP_006710283 Length = 2066 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVSFAHV 8 AVSF HV Sbjct: 1209 AVSFVHV 1215>XP_006710282 Length = 2621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AVSFAHV 8 AVSF HV Sbjct: 1764 AVSFVHV 1770>NP_001005289 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVSFAHV 8 AVS+AH+ Sbjct: 223 AVSYAHI 229>NP_001127951 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVSFAHV 8 +A+SF HV Sbjct: 331 NAISFEHV 338>NP_060573 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVSFAHV 8 +A+SF HV Sbjct: 331 NAISFEHV 338>XP_006716981 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFAHVS 9 SFAH+S Sbjct: 632 SFAHIS 637>XP_006716980 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFAHVS 9 SFAH+S Sbjct: 638 SFAHIS 643>XP_005272572 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFAHVS 9 SFAH+S Sbjct: 638 SFAHIS 643>XP_005272573 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFAHVS 9 SFAH+S Sbjct: 638 SFAHIS 643>XP_005271048 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVSFAHV 8 +A+SF HV Sbjct: 331 NAISFEHV 338>NP_149350 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 SFAHVS 9 SFAH+S Sbjct: 638 SFAHIS 643>NP_000285 Length = 406 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAVSFAHVS 9 +AVSF H + Sbjct: 139 EAVSFLHAN 147>NP_001165903 Length = 374 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAVSFAHVS 9 +AVSF H + Sbjct: 139 EAVSFLHAN 147>NP_002486 Length = 175 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVSFA 6 DAVSFA Sbjct: 133 DAVSFA 138>NP_689982 Length = 453 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DAVSFAH 7 DAV+F H Sbjct: 365 DAVAFPH 371>NP_439896 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVSFA 6 DAVSFA Sbjct: 140 DAVSFA 145>NP_036505 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 AVSFAHV 8 +VS+AHV Sbjct: 224 SVSYAHV 230>XP_006722778 Length = 499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DAVSFAH 7 DAV+F H Sbjct: 411 DAVAFPH 417>XP_005259585 Length = 705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DAVSFAH 7 DAV+F H Sbjct: 365 DAVAFPH 371>XP_006722777 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 DAVSFAH 7 DAV+F H Sbjct: 411 DAVAFPH 417>XP_005255422 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAVSFAHVS 9 +AVSF H + Sbjct: 30 EAVSFLHAN 38>XP_006721117 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAVSFAHVS 9 +AVSF H + Sbjct: 30 EAVSFLHAN 38>XP_005255421 Length = 308 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAVSFAHVS 9 +AVSF H + Sbjct: 37 EAVSFLHAN 45>XP_005255420 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAVSFAHVS 9 +AVSF H + Sbjct: 139 EAVSFLHAN 147>XP_006715391 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVSFA 6 DAVSFA Sbjct: 140 DAVSFA 145>NP_001177945 Length = 341 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DAVSFAHV 8 DAV+ AHV Sbjct: 253 DAVTKAHV 260Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.121 0.335 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 450,034 Number of extensions: 744 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |