Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 509 XP_006718908 20 509 XP_005271621 20 509 XP_006718907 20 509 XP_006718906 20 509 XP_005271619 20 509 XP_005271618 20 509 XP_006712096 17 2528 XP_006712095 17 2528 XP_005264430 17 2528 XP_006712094 17 2528 XP_006712093 17 2528 XP_005264429 17 2528 NP_060022 17 2528 NP_001229267 17 2528 NP_006566 17 3301 NP_942089 17 3301 XP_006720077 17 3301 XP_006720076 17 3301 NP_066010 17 4312 NP_001166203 17 4312 NP_068557 17 4312 NP_001166210 17 4312 NP_001166214 17 4312 XP_006724523 17 4312 XP_006724522 17 4312 NP_001073932 16 5631 NP_001368 16 5631 NP_113679 16 5631 XP_006718966 16 5631 NP_002174 16 7355 NP_001254642 16 7355 XP_005274838 16 7355 XP_005274837 16 7355 XP_005274489 16 7355 XP_005274488 16 7355 NP_001191818 15 9605 NP_000681 15 9605 NP_001193723 15 9605 NP_000683 15 9605 NP_055746 15 9605 NP_001265580 15 9605 NP_112739 15 9605 NP_002874 15 9605 NP_057458 15 9605 XP_006724352 15 9605 XP_005261753 15 9605 XP_005261752 15 9605 XP_006723153 15 9605 XP_005258727 15 9605 XP_005258726 15 9605 XP_005273217 15 9605 XP_006711844 15 9605>NP_000042 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DAVMQQVF 8 DAVMQQVF Sbjct: 2725 DAVMQQVF 2732>XP_006718908 Length = 1708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DAVMQQVF 8 DAVMQQVF Sbjct: 1377 DAVMQQVF 1384>XP_005271621 Length = 2708 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DAVMQQVF 8 DAVMQQVF Sbjct: 2377 DAVMQQVF 2384>XP_006718907 Length = 3050 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DAVMQQVF 8 DAVMQQVF Sbjct: 2719 DAVMQQVF 2726>XP_006718906 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DAVMQQVF 8 DAVMQQVF Sbjct: 2725 DAVMQQVF 2732>XP_005271619 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DAVMQQVF 8 DAVMQQVF Sbjct: 2725 DAVMQQVF 2732>XP_005271618 Length = 3056 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 DAVMQQVF 8 DAVMQQVF Sbjct: 2725 DAVMQQVF 2732>XP_006712096 Length = 802 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVMQQVFP 9 AV+Q+VFP Sbjct: 36 AVLQKVFP 43>XP_006712095 Length = 849 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVMQQVFP 9 AV+Q+VFP Sbjct: 706 AVLQKVFP 713>XP_005264430 Length = 1044 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVMQQVFP 9 AV+Q+VFP Sbjct: 278 AVLQKVFP 285>XP_006712094 Length = 1067 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVMQQVFP 9 AV+Q+VFP Sbjct: 706 AVLQKVFP 713>XP_006712093 Length = 1460 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVMQQVFP 9 AV+Q+VFP Sbjct: 706 AVLQKVFP 713>XP_005264429 Length = 1472 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVMQQVFP 9 AV+Q+VFP Sbjct: 706 AVLQKVFP 713>NP_060022 Length = 1458 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVMQQVFP 9 AV+Q+VFP Sbjct: 692 AVLQKVFP 699>NP_001229267 Length = 1453 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 AVMQQVFP 9 AV+Q+VFP Sbjct: 692 AVLQKVFP 699>NP_006566 Length = 846 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 +A M+Q+FP Sbjct: 543 EATMEQLFP 551>NP_942089 Length = 846 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 +A M+Q+FP Sbjct: 543 EATMEQLFP 551>XP_006720077 Length = 489 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 +A M+Q+FP Sbjct: 186 EATMEQLFP 194>XP_006720076 Length = 846 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 +A M+Q+FP Sbjct: 543 EATMEQLFP 551>NP_066010 Length = 1232 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VMQQVFP 9 ++QQVFP Sbjct: 204 IIQQVFP 210>NP_001166203 Length = 480 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 +AV+Q +FP Sbjct: 135 EAVLQNLFP 143>NP_068557 Length = 530 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 +AV+Q +FP Sbjct: 185 EAVLQNLFP 193>NP_001166210 Length = 530 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 +AV+Q +FP Sbjct: 185 EAVLQNLFP 193>NP_001166214 Length = 530 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 +AV+Q +FP Sbjct: 185 EAVLQNLFP 193>XP_006724523 Length = 530 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 +AV+Q +FP Sbjct: 185 EAVLQNLFP 193>XP_006724522 Length = 530 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 +AV+Q +FP Sbjct: 185 EAVLQNLFP 193>NP_001073932 Length = 4314 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 DA+++ VFP Sbjct: 1919 DALIKDVFP 1927>NP_001368 Length = 4307 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 DA+++ VFP Sbjct: 1919 DALIKDVFP 1927>NP_113679 Length = 135 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DAV +QVF Sbjct: 124 DAVCEQVF 131>XP_006718966 Length = 4300 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 DAVMQQVFP 9 DA+++ VFP Sbjct: 1919 DALIKDVFP 1927>NP_002174 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VMQQVFP 9 VMQ++FP Sbjct: 330 VMQRLFP 336>NP_001254642 Length = 300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VMQQVFP 9 VMQ++FP Sbjct: 252 VMQRLFP 258>XP_005274838 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VMQQVFP 9 VMQ++FP Sbjct: 329 VMQRLFP 335>XP_005274837 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VMQQVFP 9 VMQ++FP Sbjct: 330 VMQRLFP 336>XP_005274489 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VMQQVFP 9 VMQ++FP Sbjct: 329 VMQRLFP 335>XP_005274488 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VMQQVFP 9 VMQ++FP Sbjct: 330 VMQRLFP 336>NP_001191818 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAVMQQVFP 9 DAV ++ FP Sbjct: 47 DAVSRKTFP 55>NP_000681 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAVMQQVFP 9 DAV ++ FP Sbjct: 47 DAVSRKTFP 55>NP_001193723 Length = 1312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DAV++Q F Sbjct: 242 DAVLKQAF 249>NP_000683 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAVMQQVFP 9 DAV ++ FP Sbjct: 47 DAVSKKTFP 55>NP_055746 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 +AV+QQ F Sbjct: 546 EAVLQQAF 553>NP_001265580 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DA+MQ+ F Sbjct: 495 DALMQKAF 502>NP_112739 Length = 1226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DAV++Q F Sbjct: 242 DAVLKQAF 249>NP_002874 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DA+MQ+ F Sbjct: 495 DALMQKAF 502>NP_057458 Length = 1312 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DAV++Q F Sbjct: 242 DAVLKQAF 249>XP_006724352 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DA+MQ+ F Sbjct: 495 DALMQKAF 502>XP_005261753 Length = 628 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DA+MQ+ F Sbjct: 536 DALMQKAF 543>XP_005261752 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DA+MQ+ F Sbjct: 550 DALMQKAF 557>XP_006723153 Length = 754 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 +AV+QQ F Sbjct: 419 EAVLQQAF 426>XP_005258727 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 +AV+QQ F Sbjct: 546 EAVLQQAF 553>XP_005258726 Length = 881 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 +AV+QQ F Sbjct: 546 EAVLQQAF 553>XP_005273217 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DAV++Q F Sbjct: 242 DAVLKQAF 249>XP_006711844 Length = 1276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVMQQVF 8 DAV++Q F Sbjct: 242 DAVLKQAF 249Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.136 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 360,225 Number of extensions: 586 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |