Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 19 665 NP_653080 19 665 XP_005267292 19 665 XP_005267291 19 665 XP_005267290 19 665 NP_061130 17 3301 NP_055093 17 4312 NP_001182325 17 4312 NP_997625 17 4312 NP_001032241 17 4312 NP_005729 17 4312 NP_001073280 16 5631 NP_005210 16 5631 XP_005268441 16 5631 NP_000060 16 7355 NP_001231118 16 7355 NP_001231121 16 7355 NP_055564 16 7355 NP_001231119 16 7355 NP_001231120 16 7355 NP_001231122 16 7355 NP_004378 16 7355 NP_056355 16 7355 NP_004609 16 7355 NP_006746 16 7355 XP_005256833 16 7355 XP_006720533 16 7355 XP_006720532 16 7355 XP_005254354 16 7355 XP_006720406 16 7355 XP_006720405 16 7355 XP_006720404 16 7355 XP_006720403 16 7355 XP_006720402 16 7355 XP_006720400 16 7355 XP_006720399 16 7355 XP_005265877 16 7355 XP_005245535 16 7355 XP_005245161 16 7355 NP_037485 16 7355 NP_055136 15 9605>NP_005091 Length = 1782 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DAVEMEKME 9 DAVE EKME Sbjct: 853 DAVEREKME 861>NP_653080 Length = 1684 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DAVEMEKME 9 DAVE EKME Sbjct: 755 DAVEREKME 763>XP_005267292 Length = 1677 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DAVEMEKME 9 DAVE EKME Sbjct: 748 DAVEREKME 756>XP_005267291 Length = 1684 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DAVEMEKME 9 DAVE EKME Sbjct: 755 DAVEREKME 763>XP_005267290 Length = 1782 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DAVEMEKME 9 DAVE EKME Sbjct: 853 DAVEREKME 861>NP_061130 Length = 513 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DAVEMEKM 8 DAVEM++M Sbjct: 161 DAVEMDEM 168>NP_055093 Length = 839 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DAVEMEKME 9 D EMEK+E Sbjct: 730 DPTEMEKVE 738>NP_001182325 Length = 200 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DAVEMEKME 9 D+V++E+ME Sbjct: 101 DSVDVERME 109>NP_997625 Length = 200 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DAVEMEKME 9 D+V++E+ME Sbjct: 101 DSVDVERME 109>NP_001032241 Length = 200 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DAVEMEKME 9 D+V++E+ME Sbjct: 101 DSVDVERME 109>NP_005729 Length = 200 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 DAVEMEKME 9 D+V++E+ME Sbjct: 101 DSVDVERME 109>NP_001073280 Length = 1263 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VEMEKME 9 VEM+KME Sbjct: 491 VEMKKME 497>NP_005210 Length = 1272 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VEMEKME 9 VEM+KME Sbjct: 500 VEMKKME 506>XP_005268441 Length = 1250 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VEMEKME 9 VEM+KME Sbjct: 500 VEMKKME 506>NP_000060 Length = 1873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VEMEKME 9 +EME+ME Sbjct: 1633 IEMEEME 1639>NP_001231118 Length = 1644 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1335 DAVEME 1340>NP_001231121 Length = 1504 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1238 DAVEME 1243>NP_055564 Length = 1472 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1206 DAVEME 1211>NP_001231119 Length = 1533 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1267 DAVEME 1272>NP_001231120 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1197 DAVEME 1202>NP_001231122 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1142 DAVEME 1147>NP_004378 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVEMEKME 9 AVE+EK E Sbjct: 119 AVELEKTE 126>NP_056355 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVEMEKM 8 D VE+EK+ Sbjct: 330 DTVELEKL 337>NP_004609 Length = 1001 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVEMEKM 8 D VE+EK+ Sbjct: 328 DTVELEKL 335>NP_006746 Length = 337 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DAVEMEKM 8 DAV++E+M Sbjct: 318 DAVKLERM 325>XP_005256833 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVEMEKM 8 D VE+EK+ Sbjct: 233 DTVELEKL 240>XP_006720533 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVEMEKM 8 D VE+EK+ Sbjct: 35 DTVELEKL 42>XP_006720532 Length = 1333 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVEMEKM 8 D VE+EK+ Sbjct: 270 DTVELEKL 277>XP_005254354 Length = 1393 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAVEMEKM 8 D VE+EK+ Sbjct: 330 DTVELEKL 337>XP_006720406 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1282 DAVEME 1287>XP_006720405 Length = 1347 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1282 DAVEME 1287>XP_006720404 Length = 1477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1282 DAVEME 1287>XP_006720403 Length = 1486 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1282 DAVEME 1287>XP_006720402 Length = 1487 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1282 DAVEME 1287>XP_006720400 Length = 1526 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1282 DAVEME 1287>XP_006720399 Length = 1548 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 1282 DAVEME 1287>XP_005265877 Length = 286 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVEMEKME 9 AVE+EK E Sbjct: 81 AVELEKTE 88>XP_005245535 Length = 1854 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 VEMEKME 9 +EME+ME Sbjct: 1614 IEMEEME 1620>XP_005245161 Length = 306 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 257 DAVEME 262>NP_037485 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 DAVEME 6 DAVEME Sbjct: 296 DAVEME 301>NP_055136 Length = 252 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AVEMEKME 9 A EMEK+E Sbjct: 209 AKEMEKVE 216Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.115 0.266 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 457,172 Number of extensions: 866 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |