Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_057526 16 5631 NP_001185470 16 5631 NP_001035548 16 5631 NP_001123999 16 5631 NP_001035529 16 5631 NP_055948 16 5631 NP_001124000 16 5631 NP_001238900 16 5631 NP_003962 16 5631 XP_005257831 16 5631 XP_006722226 16 5631 XP_005257830 16 5631 XP_005257829 16 5631 XP_005257828 16 5631 XP_005257827 16 5631 XP_005257826 16 5631 XP_005257825 16 5631 XP_005257824 16 5631 XP_006720932 16 5631 XP_005255247 16 5631 XP_006720931 16 5631 XP_005255245 16 5631 XP_005255244 16 5631 XP_005272073 16 5631 XP_005272072 16 5631 NP_002197 15 9605 NP_001138468 15 9605 NP_001138469 15 9605 NP_001137310 15 9605 NP_808218 15 9605 NP_001271439 15 9605 NP_001271438 15 9605 XP_006721567 15 9605 XP_005268907 15 9605 XP_005268906 15 9605 XP_005268905 15 9605 XP_005268904 15 9605 XP_005268903 15 9605 XP_005268902 15 9605 XP_005268901 15 9605 XP_005268899 15 9605 XP_005268898 15 9605 XP_005268897 15 9605 XP_005268896 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DATLALFAR 9 DATLAL AR Sbjct: 3734 DATLALLAR 3742>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DATLALFAR 9 DATLAL AR Sbjct: 3726 DATLALLAR 3734>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DATLALFAR 9 DATLAL AR Sbjct: 3687 DATLALLAR 3695>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DATLALFAR 9 DATLAL AR Sbjct: 3766 DATLALLAR 3774>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DATLALFAR 9 DATLAL AR Sbjct: 3779 DATLALLAR 3787>NP_057526 Length = 948 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DATLALFA 8 D TLA+FA Sbjct: 766 DVTLAVFA 773>NP_001185470 Length = 941 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DATLALFA 8 D TLA+FA Sbjct: 766 DVTLAVFA 773>NP_001035548 Length = 941 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DATLALFA 8 D TLA+FA Sbjct: 766 DVTLAVFA 773>NP_001123999 Length = 1311 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1009 DGTLAIFHR 1017>NP_001035529 Length = 1330 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1012 DGTLAIFHR 1020>NP_055948 Length = 1336 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1018 DGTLAIFHR 1026>NP_001124000 Length = 1321 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1019 DGTLAIFHR 1027>NP_001238900 Length = 1177 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 862 DGTLAIFHR 870>NP_003962 Length = 1307 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1005 DGTLAIFHR 1013>XP_005257831 Length = 1164 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 862 DGTLAIFHR 870>XP_006722226 Length = 1173 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 858 DGTLAIFHR 866>XP_005257830 Length = 1181 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 866 DGTLAIFHR 874>XP_005257829 Length = 1195 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 880 DGTLAIFHR 888>XP_005257828 Length = 1320 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1005 DGTLAIFHR 1013>XP_005257827 Length = 1324 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1009 DGTLAIFHR 1017>XP_005257826 Length = 1325 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1023 DGTLAIFHR 1031>XP_005257825 Length = 1334 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1019 DGTLAIFHR 1027>XP_005257824 Length = 1338 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1023 DGTLAIFHR 1031>XP_006720932 Length = 1083 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 765 DGTLAIFHR 773>XP_005255247 Length = 1322 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1004 DGTLAIFHR 1012>XP_006720931 Length = 1328 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1010 DGTLAIFHR 1018>XP_005255245 Length = 1331 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1013 DGTLAIFHR 1021>XP_005255244 Length = 1337 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DATLALFAR 9 D TLA+F R Sbjct: 1019 DGTLAIFHR 1027>XP_005272073 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DATLALFA 8 D TLA+FA Sbjct: 766 DVTLAVFA 773>XP_005272072 Length = 951 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DATLALFA 8 D TLA+FA Sbjct: 766 DVTLAVFA 773>NP_002197 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 671 DGTTALFA 678>NP_001138468 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 675 DGTTALFA 682>NP_001138469 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 578 DGTTALFA 585>NP_001137310 Length = 522 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DATLALF 7 DAT+A+F Sbjct: 356 DATVAIF 362>NP_808218 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DATLALF 7 DAT+A+F Sbjct: 356 DATVAIF 362>NP_001271439 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DATLALF 7 DAT+A+F Sbjct: 313 DATVAIF 319>NP_001271438 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DATLALF 7 DAT+A+F Sbjct: 339 DATVAIF 345>XP_006721567 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 DATLALF 7 DAT+A+F Sbjct: 319 DATVAIF 325>XP_005268907 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 513 DGTTALFA 520>XP_005268906 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 557 DGTTALFA 564>XP_005268905 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 557 DGTTALFA 564>XP_005268904 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 557 DGTTALFA 564>XP_005268903 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 558 DGTTALFA 565>XP_005268902 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 558 DGTTALFA 565>XP_005268901 Length = 1068 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 602 DGTTALFA 609>XP_005268899 Length = 1131 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 665 DGTTALFA 672>XP_005268898 Length = 1162 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 715 DGTTALFA 722>XP_005268897 Length = 1175 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 709 DGTTALFA 716>XP_005268896 Length = 1181 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 DATLALFA 8 D T ALFA Sbjct: 715 DGTTALFA 722Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.138 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 272,202 Number of extensions: 311 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |