Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_443179 18 1135 NP_006432 17 4312 NP_001186689 17 4312 NP_001186687 17 4312 NP_001123363 16 5631 NP_001005162 16 5631 NP_001004052 16 5631 NP_057382 16 7355 NP_001106849 15 9605 NP_060663 15 9605 NP_001019831 15 9605 NP_003938 15 9605 NP_057257 15 9605 NP_001073996 15 9605 XP_006713880 15 9605 XP_006713879 15 9605 XP_006713878 15 9605 XP_006713877 15 9605 XP_006713874 15 9605 XP_006713873 15 9605 XP_005265276 15 9605 XP_005265275 15 9605 XP_006712602 15 9605>NP_443179 Length = 2170 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DARESAIST 9 DARE AIST Sbjct: 598 DARECAIST 606>NP_006432 Length = 203 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DARESAIST 9 D RE A+ST Sbjct: 118 DVREEALST 126>NP_001186689 Length = 179 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DARESAIST 9 D RE A+ST Sbjct: 94 DVREEALST 102>NP_001186687 Length = 146 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DARESAIST 9 D RE A+ST Sbjct: 61 DVREEALST 69>NP_001123363 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 +ARESA+S Sbjct: 215 EARESALS 222>NP_001005162 Length = 335 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DARESAIST 9 DAR A+ST Sbjct: 251 DARSKALST 259>NP_001004052 Length = 323 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 DARESAIST 9 DAR A+ST Sbjct: 234 DARHKALST 242>NP_057382 Length = 709 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ARESAIST 9 ARES +ST Sbjct: 691 ARESLVST 698>NP_001106849 Length = 1328 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 DAR+SA++ Sbjct: 531 DARKSAVA 538>NP_060663 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 DAR+SA++ Sbjct: 531 DARKSAVA 538>NP_001019831 Length = 2986 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 +AR+SA+S Sbjct: 720 EARDSAVS 727>NP_003938 Length = 1663 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 +AR+SA+S Sbjct: 720 EARDSAVS 727>NP_057257 Length = 338 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DARESAIS 8 D RE+AIS Sbjct: 190 DKREAAIS 197>NP_001073996 Length = 2116 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DARESAIST 9 D+RE +ST Sbjct: 1295 DSREDPVST 1303>XP_006713880 Length = 1530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 +AR+SA+S Sbjct: 722 EARDSAVS 729>XP_006713879 Length = 1656 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 +AR+SA+S Sbjct: 722 EARDSAVS 729>XP_006713878 Length = 1665 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 +AR+SA+S Sbjct: 722 EARDSAVS 729>XP_006713877 Length = 2956 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 +AR+SA+S Sbjct: 722 EARDSAVS 729>XP_006713874 Length = 2979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 +AR+SA+S Sbjct: 722 EARDSAVS 729>XP_006713873 Length = 2988 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 DARESAIS 8 +AR+SA+S Sbjct: 722 EARDSAVS 729>XP_005265276 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DARESAIS 8 D RE+AIS Sbjct: 83 DKREAAIS 90>XP_005265275 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 DARESAIS 8 D RE+AIS Sbjct: 190 DKREAAIS 197>XP_006712602 Length = 2142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DARESAIST 9 D+RE +ST Sbjct: 1321 DSREDPVST 1329Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.105 0.239 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 299,909 Number of extensions: 326 Number of successful extensions: 23 Number of sequences better than 10000.0: 23 Number of HSP's gapped: 23 Number of HSP's successfully gapped: 23 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |