Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004110 21 175 NP_001243599 17 2528 NP_569710 17 2528 NP_005691 17 2528 NP_789792 16 5631 NP_055907 16 5631 XP_005255242 16 5631 XP_005255241 16 5631 XP_005255240 16 5631 XP_005255239 16 5631 XP_006718281 16 5631 NP_085128 16 7355 NP_038203 16 7355 NP_079229 16 7355 NP_001128119 16 7355 NP_001091966 16 7355 NP_001091963 16 7355 NP_001091962 16 7355 NP_001091961 16 7355 NP_078967 16 7355 NP_002152 16 7355 NP_940944 16 7355 XP_005258937 16 7355 XP_005258935 16 7355 XP_005253995 16 7355 XP_006719669 16 7355 XP_006713973 16 7355 XP_006713971 16 7355 NP_001091965 16 7355 NP_001091964 16 7355 NP_079390 15 9605 NP_002833 15 9605 NP_001154912 15 9605 NP_689961 15 9605 NP_001136221 15 9605 NP_065777 15 9605 NP_036337 15 9605 NP_060613 15 9605 XP_006723375 15 9605 XP_006719673 15 9605 XP_005269218 15 9605 XP_005269217 15 9605 XP_006719672 15 9605 XP_005269215 15 9605 XP_006715958 15 9605 XP_006715957 15 9605 XP_006714724 15 9605 XP_005248616 15 9605 XP_005264287 15 9605>NP_004110 Length = 993 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DAEE MYQN Sbjct: 949 DAEEAMYQN 957>NP_001243599 Length = 707 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DAE+V+Y N Sbjct: 504 DAEDVIYVN 512>NP_569710 Length = 737 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DAE+V+Y N Sbjct: 534 DAEDVIYVN 542>NP_005691 Length = 737 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DAE+V+Y N Sbjct: 534 DAEDVIYVN 542>NP_789792 Length = 1093 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EEVMYQ 8 EE+MYQ Sbjct: 245 EEIMYQ 250>NP_055907 Length = 3661 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAEEVMYQN 9 D E+V Y+N Sbjct: 3442 DGEDVPYEN 3450>XP_005255242 Length = 3609 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAEEVMYQN 9 D E+V Y+N Sbjct: 3390 DGEDVPYEN 3398>XP_005255241 Length = 3637 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAEEVMYQN 9 D E+V Y+N Sbjct: 3418 DGEDVPYEN 3426>XP_005255240 Length = 3663 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAEEVMYQN 9 D E+V Y+N Sbjct: 3444 DGEDVPYEN 3452>XP_005255239 Length = 3689 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAEEVMYQN 9 D E+V Y+N Sbjct: 3470 DGEDVPYEN 3478>XP_006718281 Length = 983 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 EEVMYQ 8 EE+MYQ Sbjct: 135 EEIMYQ 140>NP_085128 Length = 2136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 DAEEVMYQN 9 D EV++QN Sbjct: 85 DRTEVLFQN 93>NP_038203 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EVMYQN 9 E+MYQN Sbjct: 778 ELMYQN 783>NP_079229 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAEEVMYQ 8 D EE+M+Q Sbjct: 347 DPEELMFQ 354>NP_001128119 Length = 814 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EEVMYQN 9 EEV+Y N Sbjct: 527 EEVLYDN 533>NP_001091966 Length = 464 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DA+ ++Y+N Sbjct: 33 DAQRLLYRN 41>NP_001091963 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DA+ ++Y+N Sbjct: 33 DAQRLLYRN 41>NP_001091962 Length = 498 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DA+ ++Y+N Sbjct: 34 DAQRLLYRN 42>NP_001091961 Length = 511 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DA+ ++Y+N Sbjct: 47 DAQRLLYRN 55>NP_078967 Length = 510 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DA+ ++Y+N Sbjct: 46 DAQRLLYRN 54>NP_002152 Length = 1262 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EVMYQN 9 E+MYQN Sbjct: 778 ELMYQN 783>NP_940944 Length = 442 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DA+ ++Y+N Sbjct: 34 DAQRLLYRN 42>XP_005258937 Length = 117 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DA+ ++Y+N Sbjct: 34 DAQRLLYRN 42>XP_005258935 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DA+ ++Y+N Sbjct: 33 DAQRLLYRN 41>XP_005253995 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAEEVMYQ 8 D EE+M+Q Sbjct: 211 DPEELMFQ 218>XP_006719669 Length = 944 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 DAEEVMYQ 8 D EE+M+Q Sbjct: 319 DPEELMFQ 326>XP_006713973 Length = 558 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EEVMYQN 9 EEV+Y N Sbjct: 548 EEVLYDN 554>XP_006713971 Length = 835 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EEVMYQN 9 EEV+Y N Sbjct: 548 EEVLYDN 554>NP_001091965 Length = 465 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DA+ ++Y+N Sbjct: 34 DAQRLLYRN 42>NP_001091964 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 DAEEVMYQN 9 DA+ ++Y+N Sbjct: 47 DAQRLLYRN 55>NP_079390 Length = 2479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DAEEVMYQN 9 D EE+ Y N Sbjct: 1368 DKEEIKYLN 1376>NP_002833 Length = 1115 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DAEEVMYQN 9 D E ++Y+N Sbjct: 1096 DVENLIYEN 1104>NP_001154912 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DAEEVMYQN 9 D E ++Y+N Sbjct: 918 DVENLIYEN 926>NP_689961 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EEVMYQN 9 EEV+Y N Sbjct: 823 EEVVYSN 829>NP_001136221 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EEVMYQN 9 EEV+Y N Sbjct: 990 EEVVYSN 996>NP_065777 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EEVMYQN 9 EEV Y+N Sbjct: 81 EEVTYEN 87>NP_036337 Length = 286 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DAEEVMYQ 8 + EEV YQ Sbjct: 50 EGEEVFYQ 57>NP_060613 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 DAEEVMYQ 8 D+EEV+++ Sbjct: 261 DSEEVLFE 268>XP_006723375 Length = 1137 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 DAEEVMYQN 9 D E ++Y+N Sbjct: 1118 DVENLIYEN 1126>XP_006719673 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DAEEVMYQN 9 D EE+ Y N Sbjct: 886 DKEEIKYLN 894>XP_005269218 Length = 2009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DAEEVMYQN 9 D EE+ Y N Sbjct: 898 DKEEIKYLN 906>XP_005269217 Length = 2353 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DAEEVMYQN 9 D EE+ Y N Sbjct: 1399 DKEEIKYLN 1407>XP_006719672 Length = 2510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DAEEVMYQN 9 D EE+ Y N Sbjct: 1399 DKEEIKYLN 1407>XP_005269215 Length = 2510 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 DAEEVMYQN 9 D EE+ Y N Sbjct: 1399 DKEEIKYLN 1407>XP_006715958 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EEVMYQN 9 EEV+Y N Sbjct: 876 EEVVYSN 882>XP_006715957 Length = 915 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EEVMYQN 9 EEV+Y N Sbjct: 876 EEVVYSN 882>XP_006714724 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EEVMYQN 9 EEV Y+N Sbjct: 58 EEVTYEN 64>XP_005248616 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 EEVMYQN 9 EEV Y+N Sbjct: 81 EEVTYEN 87>XP_005264287 Length = 201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 DAEEVMYQ 8 + EEV YQ Sbjct: 50 EGEEVFYQ 57Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.302 0.119 0.307 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 563,249 Number of extensions: 898 Number of successful extensions: 49 Number of sequences better than 10000.0: 49 Number of HSP's gapped: 49 Number of HSP's successfully gapped: 49 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |