Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_000042                                                              21     229
XP_005271621                                                           21     229
XP_006718907                                                           21     229
XP_006718906                                                           21     229
XP_005271619                                                           21     229
XP_005271618                                                           21     229
NP_001162593                                                           18    1135
NP_002016                                                              18    1135
NP_001162594                                                           18    1135
NP_001162595                                                           18    1135
NP_001162596                                                           18    1135
NP_001164099                                                           18    1135
NP_212132                                                              17    2528
NP_001258929                                                           17    2528
NP_001258930                                                           17    2528
NP_001258928                                                           17    2528
NP_597702                                                              17    2528
NP_055817                                                              17    2528
NP_296373                                                              17    2528
XP_006711059                                                           17    2528
XP_005271350                                                           17    2528
XP_005271349                                                           17    2528
NP_060523                                                              17    2528
NP_001020279                                                           17    3301
NP_002276                                                              17    3301
NP_002051                                                              17    3301
XP_005264000                                                           17    3301
XP_006712586                                                           17    3301
XP_005263999                                                           17    3301
XP_005270807                                                           17    3301
NP_005451                                                              17    4312
XP_005276497                                                           17    4312
XP_005266674                                                           17    4312
XP_006714798                                                           17    4312
XP_006714797                                                           17    4312
XP_005272195                                                           17    4312
XP_005272196                                                           17    4312
XP_005275789                                                           17    4312
XP_005256385                                                           16    5631
XP_005256381                                                           16    5631
NP_116193                                                              16    5631
NP_058213                                                              16    7355
NP_058438                                                              16    7355
NP_001073121                                                           16    7355
NP_689957                                                              16    7355
NP_058214                                                              16    7355
NP_058436                                                              16    7355
NP_058434                                                              16    7355
NP_002533                                                              16    7355
NP_058212                                                              16    7355
NP_058437                                                              16    7355
NP_569120                                                              16    7355
NP_569122                                                              16    7355
NP_001387                                                              16    7355
NP_567824                                                              16    7355
NP_005791                                                              16    7355
NP_789763                                                              16    7355
NP_789762                                                              16    7355
NP_789764                                                              16    7355
NP_005038                                                              16    7355
NP_071371                                                              16    7355
NP_060667                                                              16    7355
NP_955458                                                              16    7355
NP_115488                                                              16    7355
NP_001257356                                                           16    7355
XP_005260990                                                           16    7355
XP_005260988                                                           16    7355
XP_006724042                                                           16    7355
XP_006724041                                                           16    7355
XP_006724040                                                           16    7355
XP_006724039                                                           16    7355
XP_005260506                                                           16    7355
XP_006723884                                                           16    7355
XP_005266271                                                           16    7355
XP_006719814                                                           16    7355
XP_005266270                                                           16    7355
XP_006718098                                                           16    7355
XP_005270288                                                           16    7355
XP_005270287                                                           16    7355
XP_005265242                                                           16    7355
NP_001191273                                                           15    9605
NP_005109                                                              15    9605
NP_001229404                                                           15    9605
NP_001229403                                                           15    9605
NP_001229401                                                           15    9605
NP_001229405                                                           15    9605
NP_003410                                                              15    9605
XP_006723195                                                           15    9605
XP_006718578                                                           15    9605
XP_006718577                                                           15    9605
XP_006718574                                                           15    9605
XP_006718570                                                           15    9605
XP_005273436                                                           15    9605
NP_872362                                                              15    9605
>NP_000042
          Length = 3056

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   CTTFRGISS 9
           C TFRGISS
Sbjct: 489 CITFRGISS 497
>XP_005271621
          Length = 2708

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   CTTFRGISS 9
           C TFRGISS
Sbjct: 141 CITFRGISS 149
>XP_006718907
          Length = 3050

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   CTTFRGISS 9
           C TFRGISS
Sbjct: 489 CITFRGISS 497
>XP_006718906
          Length = 3056

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   CTTFRGISS 9
           C TFRGISS
Sbjct: 489 CITFRGISS 497
>XP_005271619
          Length = 3056

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   CTTFRGISS 9
           C TFRGISS
Sbjct: 489 CITFRGISS 497
>XP_005271618
          Length = 3056

 Score = 20.8 bits (42), Expect =   229
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   CTTFRGISS 9
           C TFRGISS
Sbjct: 489 CITFRGISS 497
>NP_001162593
          Length = 1276

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   CTTFRGIS 8
           C TF+GIS
Sbjct: 929 CATFKGIS 936
>NP_002016
          Length = 1311

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   CTTFRGIS 8
           C TF+GIS
Sbjct: 962 CATFKGIS 969
>NP_001162594
          Length = 1301

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   CTTFRGIS 8
           C TF+GIS
Sbjct: 952 CATFKGIS 959
>NP_001162595
          Length = 1276

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   CTTFRGIS 8
           C TF+GIS
Sbjct: 927 CATFKGIS 934
>NP_001162596
          Length = 1272

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   CTTFRGIS 8
           C TF+GIS
Sbjct: 923 CATFKGIS 930
>NP_001164099
          Length = 952

 Score = 18.5 bits (36), Expect =  1135
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   CTTFRGIS 8
           C TF+GIS
Sbjct: 603 CATFKGIS 610
>NP_212132
          Length = 2109

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    CTTFRGISS 9
            C TF+ ISS
Sbjct: 1704 CVTFQNISS 1712
>NP_001258929
          Length = 2100

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    CTTFRGISS 9
            C TF+ ISS
Sbjct: 1695 CVTFQNISS 1703
>NP_001258930
          Length = 2098

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    CTTFRGISS 9
            C TF+ ISS
Sbjct: 1695 CVTFQNISS 1703
>NP_001258928
          Length = 2129

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    CTTFRGISS 9
            C TF+ ISS
Sbjct: 1726 CVTFQNISS 1734
>NP_597702
          Length = 1115

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   TTFRGIS 8
           TTFRG+S
Sbjct: 440 TTFRGLS 446
>NP_055817
          Length = 621

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   CTTFRGISS 9
           C T RGI+S
Sbjct: 229 CKTLRGINS 237
>NP_296373
          Length = 628

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1   CTTFRGISS 9
           C T RGI+S
Sbjct: 229 CKTLRGINS 237
>XP_006711059
          Length = 1517

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    CTTFRGISS 9
            C TF+ ISS
Sbjct: 1112 CVTFQNISS 1120
>XP_005271350
          Length = 1854

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    CTTFRGISS 9
            C TF+ ISS
Sbjct: 1726 CVTFQNISS 1734
>XP_005271349
          Length = 2131

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    CTTFRGISS 9
            C TF+ ISS
Sbjct: 1726 CVTFQNISS 1734
>NP_060523
          Length = 395

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   CTTFRGIS 8
           CT+F GIS
Sbjct: 168 CTSFLGIS 175
>NP_001020279
          Length = 1251

 Score = 16.9 bits (32), Expect =  3301
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   CTTFRGI 7
           CT++RG+
Sbjct: 286 CTSYRGV 292
>NP_002276
          Length = 1226

 Score = 16.9 bits (32), Expect =  3301
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   CTTFRGI 7
           CT++RG+
Sbjct: 261 CTSYRGV 267
>NP_002051
          Length = 333

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   CTTFRGISS 9
           C T+ G+SS
Sbjct: 278 CPTYNGLSS 286
>XP_005264000
          Length = 1226

 Score = 16.9 bits (32), Expect =  3301
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   CTTFRGI 7
           CT++RG+
Sbjct: 261 CTSYRGV 267
>XP_006712586
          Length = 1262

 Score = 16.9 bits (32), Expect =  3301
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   CTTFRGI 7
           CT++RG+
Sbjct: 313 CTSYRGV 319
>XP_005263999
          Length = 1278

 Score = 16.9 bits (32), Expect =  3301
 Identities = 4/7 (57%), Positives = 7/7 (100%)

Query: 1   CTTFRGI 7
           CT++RG+
Sbjct: 313 CTSYRGV 319
>XP_005270807
          Length = 333

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   CTTFRGISS 9
           C T+ G+SS
Sbjct: 278 CPTYNGLSS 286
>NP_005451
          Length = 919

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   CTTFRGIS 8
           CTT  G+S
Sbjct: 181 CTTINGLS 188
>XP_005276497
          Length = 217

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  CTTFRGIS 8
          C TFRG S
Sbjct: 49 CRTFRGRS 56
>XP_005266674
          Length = 217

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  CTTFRGIS 8
          C TFRG S
Sbjct: 49 CRTFRGRS 56
>XP_006714798
          Length = 919

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   CTTFRGIS 8
           CTT  G+S
Sbjct: 181 CTTINGLS 188
>XP_006714797
          Length = 969

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   CTTFRGIS 8
           CTT  G+S
Sbjct: 181 CTTINGLS 188
>XP_005272195
          Length = 969

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   CTTFRGIS 8
           CTT  G+S
Sbjct: 181 CTTINGLS 188
>XP_005272196
          Length = 969

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   CTTFRGIS 8
           CTT  G+S
Sbjct: 181 CTTINGLS 188
>XP_005275789
          Length = 209

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1  CTTFRGIS 8
          C TFRG S
Sbjct: 41 CRTFRGRS 48
>XP_005256385
          Length = 400

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1  CTTFRG 6
          C TFRG
Sbjct: 10 CPTFRG 15
>XP_005256381
          Length = 597

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   CTTFRG 6
           C TFRG
Sbjct: 207 CPTFRG 212
>NP_116193
          Length = 270

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1  CTTFRG 6
          C TFRG
Sbjct: 18 CLTFRG 23
>NP_058213
          Length = 410

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  CTTFRGISS 9
          CT +RG  S
Sbjct: 75 CTVYRGDKS 83
>NP_058438
          Length = 322

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  CTTFRGISS 9
          CT +RG  S
Sbjct: 75 CTVYRGDKS 83
>NP_001073121
          Length = 679

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   CTTFRGISS 9
           C+T +GIS+
Sbjct: 528 CSTGKGIST 536
>NP_689957
          Length = 2213

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1    CTTFRGISS 9
            C+T +GIS+
Sbjct: 2041 CSTGKGIST 2049
>NP_058214
          Length = 424

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  CTTFRGISS 9
          CT +RG  S
Sbjct: 75 CTVYRGDKS 83
>NP_058436
          Length = 195

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  CTTFRGISS 9
          CT +RG  S
Sbjct: 75 CTVYRGDKS 83
>NP_058434
          Length = 357

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  CTTFRGISS 9
          CT +RG  S
Sbjct: 75 CTVYRGDKS 83
>NP_002533
          Length = 345

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  CTTFRGISS 9
          CT +RG  S
Sbjct: 75 CTVYRGDKS 83
>NP_058212
          Length = 324

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  CTTFRGISS 9
          CT +RG  S
Sbjct: 75 CTVYRGDKS 83
>NP_058437
          Length = 356

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  CTTFRGISS 9
          CT +RG  S
Sbjct: 75 CTVYRGDKS 83
>NP_569120
          Length = 754

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TTFRGIS 8
           T FRG+S
Sbjct: 243 TNFRGVS 249
>NP_569122
          Length = 529

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TTFRGIS 8
           T FRG+S
Sbjct: 252 TNFRGVS 258
>NP_001387
          Length = 763

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TTFRGIS 8
           T FRG+S
Sbjct: 252 TNFRGVS 258
>NP_567824
          Length = 584

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TTFRGIS 8
           T FRG+S
Sbjct: 252 TNFRGVS 258
>NP_005791
          Length = 1092

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   CTTFRGIS 8
           CTT  G+S
Sbjct: 954 CTTVPGVS 961
>NP_789763
          Length = 202

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TTFRGI 7
           TTFRG+
Sbjct: 138 TTFRGL 143
>NP_789762
          Length = 215

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TTFRGI 7
           TTFRG+
Sbjct: 138 TTFRGL 143
>NP_789764
          Length = 235

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TTFRGI 7
           TTFRG+
Sbjct: 138 TTFRGL 143
>NP_005038
          Length = 504

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   FRGISS 9
           FRGISS
Sbjct: 399 FRGISS 404
>NP_071371
          Length = 627

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   CTTFRGISS 9
           CT F G+++
Sbjct: 557 CTDFEGLNA 565
>NP_060667
          Length = 681

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   CTTFRGISS 9
           CT F G+++
Sbjct: 611 CTDFEGLNA 619
>NP_955458
          Length = 679

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   CTTFRGISS 9
           CT F G+++
Sbjct: 609 CTDFEGLNA 617
>NP_115488
          Length = 159

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TTFRGI 7
           TTFRG+
Sbjct: 138 TTFRGL 143
>NP_001257356
          Length = 461

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 4   FRGISS 9
           FRGISS
Sbjct: 356 FRGISS 361
>XP_005260990
          Length = 535

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2  TTFRGIS 8
          T FRG+S
Sbjct: 24 TNFRGVS 30
>XP_005260988
          Length = 734

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TTFRGIS 8
           T FRG+S
Sbjct: 223 TNFRGVS 229
>XP_006724042
          Length = 754

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TTFRGIS 8
           T FRG+S
Sbjct: 243 TNFRGVS 249
>XP_006724041
          Length = 763

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TTFRGIS 8
           T FRG+S
Sbjct: 252 TNFRGVS 258
>XP_006724040
          Length = 763

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TTFRGIS 8
           T FRG+S
Sbjct: 252 TNFRGVS 258
>XP_006724039
          Length = 763

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   TTFRGIS 8
           T FRG+S
Sbjct: 252 TNFRGVS 258
>XP_005260506
          Length = 523

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   CTTFRGISS 9
           CT F G+++
Sbjct: 453 CTDFEGLNA 461
>XP_006723884
          Length = 625

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/9 (44%), Positives = 7/9 (77%)

Query: 1   CTTFRGISS 9
           CT F G+++
Sbjct: 555 CTDFEGLNA 563
>XP_005266271
          Length = 911

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   CTTFRGIS 8
           CTT  G+S
Sbjct: 773 CTTVPGVS 780
>XP_006719814
          Length = 1086

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   CTTFRGIS 8
           CTT  G+S
Sbjct: 948 CTTVPGVS 955
>XP_005266270
          Length = 1092

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 6/8 (75%)

Query: 1   CTTFRGIS 8
           CTT  G+S
Sbjct: 954 CTTVPGVS 961
>XP_006718098
          Length = 159

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TTFRGI 7
           TTFRG+
Sbjct: 138 TTFRGL 143
>XP_005270288
          Length = 159

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TTFRGI 7
           TTFRG+
Sbjct: 138 TTFRGL 143
>XP_005270287
          Length = 164

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   TTFRGI 7
           TTFRG+
Sbjct: 138 TTFRGL 143
>XP_005265242
          Length = 319

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/9 (55%), Positives = 6/9 (66%)

Query: 1  CTTFRGISS 9
          CT +RG  S
Sbjct: 75 CTVYRGDKS 83
>NP_001191273
          Length = 192

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TFRGISS 9
           TFRG++S
Sbjct: 95  TFRGMTS 101
>NP_005109
          Length = 251

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 3   TFRGISS 9
           TFRG++S
Sbjct: 154 TFRGMTS 160
>NP_001229404
          Length = 488

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  CTTFRG 6
          C++FRG
Sbjct: 11 CSSFRG 16
>NP_001229403
          Length = 488

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  CTTFRG 6
          C++FRG
Sbjct: 11 CSSFRG 16
>NP_001229401
          Length = 488

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  CTTFRG 6
          C++FRG
Sbjct: 11 CSSFRG 16
>NP_001229405
          Length = 488

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  CTTFRG 6
          C++FRG
Sbjct: 11 CSSFRG 16
>NP_003410
          Length = 488

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  CTTFRG 6
          C++FRG
Sbjct: 11 CSSFRG 16
>XP_006723195
          Length = 488

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 1  CTTFRG 6
          C++FRG
Sbjct: 11 CSSFRG 16
>XP_006718578
          Length = 150

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  TTFRGI 7
          TT+RGI
Sbjct: 34 TTYRGI 39
>XP_006718577
          Length = 226

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  TTFRGI 7
          TT+RGI
Sbjct: 34 TTYRGI 39
>XP_006718574
          Length = 246

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  TTFRGI 7
          TT+RGI
Sbjct: 34 TTYRGI 39
>XP_006718570
          Length = 288

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  TTFRGI 7
          TT+RGI
Sbjct: 34 TTYRGI 39
>XP_005273436
          Length = 741

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/9 (55%), Positives = 7/9 (77%)

Query: 1   CTTFRGISS 9
           C+T RG+ S
Sbjct: 723 CSTPRGLKS 731
>NP_872362
          Length = 288

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2  TTFRGI 7
          TT+RGI
Sbjct: 34 TTYRGI 39
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.329    0.133    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 477,724
Number of extensions: 987
Number of successful extensions: 94
Number of sequences better than 10000.0: 94
Number of HSP's gapped: 94
Number of HSP's successfully gapped: 94
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.2 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package