Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 665 XP_006718908 19 665 XP_005271621 19 665 XP_006718907 19 665 XP_006718906 19 665 XP_005271619 19 665 XP_005271618 19 665 NP_055952 17 3301 XP_005250906 17 3301 NP_001135451 17 4312 NP_005648 17 4312 NP_001135452 17 4312 NP_055625 17 4312 XP_005254691 17 4312 XP_006711734 17 4312 XP_006711733 17 4312 XP_006711732 17 4312 XP_006711731 17 4312 XP_006711730 17 4312 XP_006711729 17 4312 XP_005245695 17 4312 NP_877949 16 5631 NP_000924 16 5631 NP_001166117 16 5631 XP_005260785 16 5631 XP_006723635 16 5631 XP_006723634 16 5631 XP_006723633 16 5631 XP_005260781 16 5631 XP_006723632 16 5631 XP_006723631 16 5631 NP_878918 16 7355 NP_055995 16 7355 NP_003310 16 7355 NP_612477 16 7355 NP_597676 16 7355 NP_001243779 16 7355 NP_001275552 16 7355 NP_596869 16 7355 NP_001275551 16 7355 NP_001275553 16 7355 NP_002906 16 7355 XP_005267517 16 7355 XP_005267516 16 7355 XP_005267515 16 7355 XP_005267514 16 7355 XP_005267513 16 7355 XP_005267512 16 7355 XP_005267511 16 7355 XP_005246888 16 7355 XP_006712788 16 7355 XP_006712787 16 7355 XP_006712786 16 7355 NP_853536 16 7355 NP_001254479 16 7355 NP_597681 16 7355 NP_001157101 15 9605 NP_079339 15 9605>NP_000042 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 CTSVSK VE Sbjct: 2112 CTSVSKEVE 2120>XP_006718908 Length = 1708 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 CTSVSK VE Sbjct: 764 CTSVSKEVE 772>XP_005271621 Length = 2708 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 CTSVSK VE Sbjct: 1764 CTSVSKEVE 1772>XP_006718907 Length = 3050 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 CTSVSK VE Sbjct: 2106 CTSVSKEVE 2114>XP_006718906 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 CTSVSK VE Sbjct: 2112 CTSVSKEVE 2120>XP_005271619 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 CTSVSK VE Sbjct: 2112 CTSVSKEVE 2120>XP_005271618 Length = 3056 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 CTSVSK VE Sbjct: 2112 CTSVSKEVE 2120>NP_055952 Length = 821 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C VSKV+E Sbjct: 618 CQHVSKVIE 626>XP_005250906 Length = 785 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C VSKV+E Sbjct: 582 CQHVSKVIE 590>NP_001135451 Length = 1975 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C S+S+V+E Sbjct: 106 CGSISQVIE 114>NP_005648 Length = 1972 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C S+S+V+E Sbjct: 101 CGSISQVIE 109>NP_001135452 Length = 1977 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C S+S+V+E Sbjct: 106 CGSISQVIE 114>NP_055625 Length = 3117 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 CTSVSK 6 CTSVSK Sbjct: 1999 CTSVSK 2004>XP_005254691 Length = 1972 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C S+S+V+E Sbjct: 101 CGSISQVIE 109>XP_006711734 Length = 3136 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 CTSVSK 6 CTSVSK Sbjct: 2018 CTSVSK 2023>XP_006711733 Length = 3137 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 CTSVSK 6 CTSVSK Sbjct: 2019 CTSVSK 2024>XP_006711732 Length = 3154 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 CTSVSK 6 CTSVSK Sbjct: 2036 CTSVSK 2041>XP_006711731 Length = 3157 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 CTSVSK 6 CTSVSK Sbjct: 2039 CTSVSK 2044>XP_006711730 Length = 3157 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 CTSVSK 6 CTSVSK Sbjct: 2039 CTSVSK 2044>XP_006711729 Length = 3158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 CTSVSK 6 CTSVSK Sbjct: 2040 CTSVSK 2045>XP_005245695 Length = 3158 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 CTSVSK 6 CTSVSK Sbjct: 2040 CTSVSK 2045>NP_877949 Length = 1175 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CT V K+V Sbjct: 958 CTQVDKIV 965>NP_000924 Length = 1194 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CT V K+V Sbjct: 958 CTQVDKIV 965>NP_001166117 Length = 1187 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CT V K+V Sbjct: 970 CTQVDKIV 977>XP_005260785 Length = 938 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CT V K+V Sbjct: 702 CTQVDKIV 709>XP_006723635 Length = 1175 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CT V K+V Sbjct: 958 CTQVDKIV 965>XP_006723634 Length = 1187 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CT V K+V Sbjct: 970 CTQVDKIV 977>XP_006723633 Length = 1194 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CT V K+V Sbjct: 958 CTQVDKIV 965>XP_005260781 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CT V K+V Sbjct: 970 CTQVDKIV 977>XP_006723632 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CT V K+V Sbjct: 970 CTQVDKIV 977>XP_006723631 Length = 1206 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CT V K+V Sbjct: 970 CTQVDKIV 977>NP_878918 Length = 6907 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C SV++++E Sbjct: 5348 CPSVAEIIE 5356>NP_055995 Length = 6885 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C SV++++E Sbjct: 5348 CPSVAEIIE 5356>NP_003310 Length = 26926 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C+S KVVE Sbjct: 4797 CSSCVKVVE 4805>NP_612477 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 CT + K++E Sbjct: 63 CTELLKIIE 71>NP_597676 Length = 27051 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C+S KVVE Sbjct: 4922 CSSCVKVVE 4930>NP_001243779 Length = 34350 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C+S KVVE Sbjct: 12221 CSSCVKVVE 12229>NP_001275552 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 CT + K++E Sbjct: 63 CTELLKIIE 71>NP_596869 Length = 33423 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C+S KVVE Sbjct: 11294 CSSCVKVVE 11302>NP_001275551 Length = 482 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 CT + K++E Sbjct: 63 CTELLKIIE 71>NP_001275553 Length = 187 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 CT + K++E Sbjct: 63 CTELLKIIE 71>NP_002906 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 C S SKV+ Sbjct: 165 CNSTSKVI 172>XP_005267517 Length = 6883 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C SV++++E Sbjct: 5309 CPSVAEIIE 5317>XP_005267516 Length = 6884 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C SV++++E Sbjct: 5348 CPSVAEIIE 5356>XP_005267515 Length = 6899 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C SV++++E Sbjct: 5348 CPSVAEIIE 5356>XP_005267514 Length = 6908 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C SV++++E Sbjct: 5348 CPSVAEIIE 5356>XP_005267513 Length = 6921 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C SV++++E Sbjct: 5348 CPSVAEIIE 5356>XP_005267512 Length = 6922 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C SV++++E Sbjct: 5348 CPSVAEIIE 5356>XP_005267511 Length = 6922 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CTSVSKVVE 9 C SV++++E Sbjct: 5348 CPSVAEIIE 5356>XP_005246888 Length = 22663 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C+S KVVE Sbjct: 534 CSSCVKVVE 542>XP_006712788 Length = 24022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C+S KVVE Sbjct: 1893 CSSCVKVVE 1901>XP_006712787 Length = 33978 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C+S KVVE Sbjct: 11849 CSSCVKVVE 11857>XP_006712786 Length = 35484 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C+S KVVE Sbjct: 13355 CSSCVKVVE 13363>NP_853536 Length = 305 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 C S SKV+ Sbjct: 165 CNSTSKVI 172>NP_001254479 Length = 35991 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C+S KVVE Sbjct: 13862 CSSCVKVVE 13870>NP_597681 Length = 27118 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CTSVSKVVE 9 C+S KVVE Sbjct: 4989 CSSCVKVVE 4997>NP_001157101 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CTS KV+ Sbjct: 324 CTSPKKVI 331>NP_079339 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CTSVSKVV 8 CTS KV+ Sbjct: 324 CTSPKKVI 331Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.115 0.309 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 302,308 Number of extensions: 243 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |