Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 21 229 XP_005273257 21 229 NP_872590 17 3301 NP_002583 17 3301 NP_871626 16 5631 NP_005832 16 5631 NP_955359 16 5631 NP_001244967 16 5631 NP_001244968 16 5631 NP_055087 16 5631 NP_002709 16 5631 NP_003871 16 5631 NP_001177376 16 5631 NP_001253996 16 5631 NP_937882 16 5631 XP_005254194 16 5631 XP_005262743 16 5631 XP_006713749 16 5631 XP_006712670 16 5631 NP_071393 16 5631 NP_001243718 16 7355 NP_001243719 16 7355 NP_005174 16 7355 NP_001122312 16 7355 NP_001122311 16 7355 NP_000711 16 7355 NP_005833 16 7355 NP_000443 16 7355 NP_001135918 16 7355 NP_065208 16 7355 NP_001193856 16 7355 XP_006719816 16 7355 XP_005266274 16 7355 XP_006719815 16 7355 XP_005273533 16 7355 XP_006715067 16 7355 XP_005265505 16 7355 XP_006713388 16 7355 NP_149420 16 7355 NP_065210 16 7355 NP_065209 16 7355 NP_000028 16 7355 NP_000072 15 9605 NP_002205 15 9605 NP_996562 15 9605 NP_055181 15 9605 NP_996561 15 9605 NP_001005288 15 9605 XP_005273087 15 9605 XP_006711794 15 9605 XP_005273086 15 9605 XP_005273085 15 9605 XP_005273084 15 9605 NP_001004752 15 9605>NP_064450 Length = 1722 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 CSRIIAMGV 9 CSRIIAMG+ Sbjct: 562 CSRIIAMGL 570>XP_005273257 Length = 1726 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 CSRIIAMGV 9 CSRIIAMG+ Sbjct: 562 CSRIIAMGL 570>NP_872590 Length = 261 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R +AMGV Sbjct: 62 CDRNLAMGV 70>NP_002583 Length = 261 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R +AMGV Sbjct: 62 CDRNLAMGV 70>NP_871626 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R+ AMG+ Sbjct: 384 CERMEAMGI 392>NP_005832 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSRIIAMG 8 CSR + MG Sbjct: 254 CSRYLCMG 261>NP_955359 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSRIIAMG 8 CSR + MG Sbjct: 254 CSRYLCMG 261>NP_001244967 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSRIIAMG 8 CSR + MG Sbjct: 254 CSRYLCMG 261>NP_001244968 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSRIIAMG 8 CSR + MG Sbjct: 254 CSRYLCMG 261>NP_055087 Length = 1686 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CSRIIAMGV 9 CSR MGV Sbjct: 550 CSRSCGMGV 558>NP_002709 Length = 1150 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R+ AMG+ Sbjct: 1005 CERMEAMGI 1013>NP_003871 Length = 354 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CSRIIAMGV 9 CSR MG+ Sbjct: 219 CSRTCGMGI 227>NP_001177376 Length = 414 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R+ AMG+ Sbjct: 269 CERMEAMGI 277>NP_001253996 Length = 171 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CSRIIAMG 8 C R++AMG Sbjct: 97 CFRLMAMG 104>NP_937882 Length = 372 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CSRIIAMGV 9 CSR MG+ Sbjct: 237 CSRTCGMGI 245>XP_005254194 Length = 1689 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CSRIIAMGV 9 CSR MGV Sbjct: 550 CSRSCGMGV 558>XP_005262743 Length = 319 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CSRIIAMG 8 CSR + MG Sbjct: 254 CSRYLCMG 261>XP_006713749 Length = 1150 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R+ AMG+ Sbjct: 1005 CERMEAMGI 1013>XP_006712670 Length = 138 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CSRIIAMG 8 C R++AMG Sbjct: 97 CFRLMAMG 104>NP_071393 Length = 349 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CSRIIAMG 8 C R++A+G Sbjct: 123 CCRVLALG 130>NP_001243718 Length = 1966 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R++AM + Sbjct: 1494 CKRLVAMNM 1502>NP_001243719 Length = 1912 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R++AM + Sbjct: 1440 CKRLVAMNM 1448>NP_005174 Length = 1977 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R++AM + Sbjct: 1505 CKRLVAMNM 1513>NP_001122312 Length = 2161 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R++AM + Sbjct: 1528 CKRLVAMNM 1536>NP_001122311 Length = 2137 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R++AM + Sbjct: 1513 CKRLVAMNM 1521>NP_000711 Length = 2181 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R++AM + Sbjct: 1548 CKRLVAMNM 1556>NP_005833 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C+R AMGV Sbjct: 250 CTRWSAMGV 258>NP_000443 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CSRIIAMGV 9 CS ++A+G+ Sbjct: 132 CSTLLALGM 140>NP_001135918 Length = 1897 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRIIAMG 8 SRIIA+G Sbjct: 1014 SRIIALG 1020>NP_065208 Length = 1856 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRIIAMG 8 SRIIA+G Sbjct: 973 SRIIALG 979>NP_001193856 Length = 4707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CSRIIA 6 CSR+IA Sbjct: 2909 CSRVIA 2914>XP_006719816 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C+R AMGV Sbjct: 250 CTRWSAMGV 258>XP_005266274 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C+R AMGV Sbjct: 250 CTRWSAMGV 258>XP_006719815 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C+R AMGV Sbjct: 250 CTRWSAMGV 258>XP_005273533 Length = 1921 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRIIAMG 8 SRIIA+G Sbjct: 1014 SRIIALG 1020>XP_006715067 Length = 4707 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CSRIIA 6 CSR+IA Sbjct: 2909 CSRVIA 2914>XP_005265505 Length = 2146 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R++AM + Sbjct: 1513 CKRLVAMNM 1521>XP_006713388 Length = 2194 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 C R++AM + Sbjct: 1561 CKRLVAMNM 1569>NP_149420 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SRIIAMGV 9 +R+IA+GV Sbjct: 137 TRVIALGV 144>NP_065210 Length = 1719 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRIIAMG 8 SRIIA+G Sbjct: 973 SRIIALG 979>NP_065209 Length = 1881 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRIIAMG 8 SRIIA+G Sbjct: 973 SRIIALG 979>NP_000028 Length = 1880 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 SRIIAMG 8 SRIIA+G Sbjct: 973 SRIIALG 979>NP_000072 Length = 3801 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CSRIIAMGV 9 C++I+ +G+ Sbjct: 1371 CTKILLLGI 1379>NP_002205 Length = 769 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CSRIIAMG 8 C+R +A+G Sbjct: 55 CARCLALG 62>NP_996562 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 CS+ I +GV Sbjct: 239 CSKAIRVGV 247>NP_055181 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 CS+ I +GV Sbjct: 251 CSKAIRVGV 259>NP_996561 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CSRIIAMGV 9 CS+ I +GV Sbjct: 239 CSKAIRVGV 247>NP_001005288 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 SRIIAMGV 9 +RI+AMG+ Sbjct: 141 NRILAMGL 148>XP_005273087 Length = 2788 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CSRIIAMGV 9 C++I+ +G+ Sbjct: 1371 CTKILLLGI 1379>XP_006711794 Length = 3022 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CSRIIAMGV 9 C++I+ +G+ Sbjct: 592 CTKILLLGI 600>XP_005273086 Length = 3264 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CSRIIAMGV 9 C++I+ +G+ Sbjct: 1371 CTKILLLGI 1379>XP_005273085 Length = 3755 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CSRIIAMGV 9 C++I+ +G+ Sbjct: 1371 CTKILLLGI 1379>XP_005273084 Length = 3801 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CSRIIAMGV 9 C++I+ +G+ Sbjct: 1371 CTKILLLGI 1379>NP_001004752 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 SRIIAMGV 9 SRII MG+ Sbjct: 141 SRIIQMGL 148Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.144 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 410,218 Number of extensions: 687 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |