Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005912 19 869 XP_005248577 19 869 XP_005248576 19 869 NP_065871 18 1482 XP_005260528 18 1482 NP_055273 17 2528 XP_005245150 17 2528 XP_006711340 17 2528 NP_066022 16 5631 XP_006723369 16 5631 NP_003652 16 7355 NP_001130012 16 7355 NP_663318 16 7355 NP_001130013 16 7355 NP_001243000 16 7355 NP_079160 16 7355 XP_005261853 16 7355 XP_005261852 16 7355 XP_005257603 16 7355 XP_006722058 16 7355 XP_005257602 16 7355 XP_005268132 16 7355 XP_006718551 16 7355 XP_005273928 16 7355 XP_006713095 16 7355 XP_005245231 16 7355 NP_689973 16 7355 NP_071882 15 9605 NP_001035292 15 9605 XP_005262827 15 9605 XP_006714170 15 9605 XP_006714169 15 9605 XP_006714168 15 9605 XP_005262826 15 9605 XP_006714167 15 9605 XP_005264540 15 9605 XP_006712138 15 9605>NP_005912 Length = 1512 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RRLMAIAD 9 RRLMAIAD Sbjct: 854 RRLMAIAD 861>XP_005248577 Length = 1349 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RRLMAIAD 9 RRLMAIAD Sbjct: 691 RRLMAIAD 698>XP_005248576 Length = 1375 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RRLMAIAD 9 RRLMAIAD Sbjct: 717 RRLMAIAD 724>NP_065871 Length = 1659 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 CRRLMAIA 8 CRRLMA++ Sbjct: 901 CRRLMALS 908>XP_005260528 Length = 956 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 CRRLMAIA 8 CRRLMA++ Sbjct: 198 CRRLMALS 205>NP_055273 Length = 609 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CRRLMAIAD 9 CR L+ IAD Sbjct: 182 CRELLRIAD 190>XP_005245150 Length = 609 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CRRLMAIAD 9 CR L+ IAD Sbjct: 182 CRELLRIAD 190>XP_006711340 Length = 684 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CRRLMAIAD 9 CR L+ IAD Sbjct: 257 CRELLRIAD 265>NP_066022 Length = 2564 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRRLMAIAD 9 C R+ A+AD Sbjct: 49 CSRIKALAD 57>XP_006723369 Length = 2394 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRRLMAIAD 9 C R+ A+AD Sbjct: 49 CSRIKALAD 57>NP_003652 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRLMAIAD 9 RRL A+AD Sbjct: 156 RRLRALAD 163>NP_001130012 Length = 398 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRLMAIAD 9 RRL A+AD Sbjct: 156 RRLRALAD 163>NP_663318 Length = 414 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRLMAIAD 9 RRL A+AD Sbjct: 172 RRLRALAD 179>NP_001130013 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRLMAIAD 9 RRL A+AD Sbjct: 138 RRLRALAD 145>NP_001243000 Length = 5207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRLMAIAD 9 +RL+A+AD Sbjct: 1079 KRLIAVAD 1086>NP_079160 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRRLMAI 7 CR LMAI Sbjct: 179 CRGLMAI 185>XP_005261853 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRLMAIAD 9 RRL A+AD Sbjct: 138 RRLRALAD 145>XP_005261852 Length = 396 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRLMAIAD 9 RRL A+AD Sbjct: 154 RRLRALAD 161>XP_005257603 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRLMAIAD 9 +RL+A+AD Sbjct: 1128 KRLIAVAD 1135>XP_006722058 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRLMAIAD 9 +RL+A+AD Sbjct: 1128 KRLIAVAD 1135>XP_005257602 Length = 5256 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 RRLMAIAD 9 +RL+A+AD Sbjct: 1128 KRLIAVAD 1135>XP_005268132 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRRLMAI 7 CR LMAI Sbjct: 179 CRGLMAI 185>XP_006718551 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRLMAIAD 9 RRL A+AD Sbjct: 309 RRLRALAD 316>XP_005273928 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRLMAIAD 9 RRL A+AD Sbjct: 309 RRLRALAD 316>XP_006713095 Length = 1222 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RRLMAIA 8 RRLMA+A Sbjct: 5 RRLMALA 11>XP_005245231 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CRRLMAI 7 CRR MA+ Sbjct: 11 CRRKMAV 17>NP_689973 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RRLMAIAD 9 RRL A+AD Sbjct: 309 RRLRALAD 316>NP_071882 Length = 673 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CRRLMAIA 8 C R+MA+A Sbjct: 541 CCRIMALA 548>NP_001035292 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CRRLMAI 7 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_005262827 Length = 269 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CRRLMAI 7 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_006714170 Length = 274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CRRLMAI 7 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_006714169 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CRRLMAI 7 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_006714168 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CRRLMAI 7 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_005262826 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CRRLMAI 7 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_006714167 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CRRLMAI 7 CRR MA+ Sbjct: 137 CRRWMAL 143>XP_005264540 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CRRLMAIA 8 C R+MA+A Sbjct: 540 CCRIMALA 547>XP_006712138 Length = 678 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CRRLMAIA 8 C R+MA+A Sbjct: 546 CCRIMALA 553Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.348 0.144 0.468 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 352,006 Number of extensions: 416 Number of successful extensions: 37 Number of sequences better than 10000.0: 37 Number of HSP's gapped: 37 Number of HSP's successfully gapped: 37 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |