Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1135 NP_671714 18 1135 XP_006715890 18 1135 XP_005250160 18 1135 XP_005250159 18 1135 NP_060004 17 2528 NP_001093582 17 2528 NP_004865 17 3301 NP_001191807 17 3301 NP_004578 17 3301 NP_001036041 17 3301 NP_001092903 17 4312 NP_002463 17 4312 NP_149022 17 4312 NP_775820 17 4312 XP_005273630 17 4312 NP_061158 17 4312 NP_001157718 16 5631 NP_004378 16 7355 NP_001128669 16 7355 NP_055510 16 7355 XP_005256934 16 7355 XP_006721670 16 7355 XP_005265877 16 7355 XP_005265157 16 7355 XP_005265156 16 7355 XP_006713187 16 7355 NP_835467 16 7355 NP_060626 15 9605 NP_056193 15 9605 NP_060921 15 9605 NP_066564 15 9605 NP_001274359 15 9605 NP_001185980 15 9605 NP_001268369 15 9605 NP_001001552 15 9605 NP_057531 15 9605 NP_001274355 15 9605 NP_001274358 15 9605 NP_003355 15 9605 NP_001274357 15 9605 NP_001037770 15 9605 NP_001185979 15 9605 NP_001185981 15 9605 XP_006721881 15 9605 XP_006721880 15 9605 XP_005249895 15 9605 XP_005249832 15 9605 XP_006715803 15 9605 XP_006715802 15 9605 XP_006715801 15 9605 XP_005248817 15 9605 XP_006715610 15 9605 XP_006711695 15 9605>NP_005742 Length = 3907 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RLQAAVEK 9 RLQAAVEK Sbjct: 1849 RLQAAVEK 1856>NP_671714 Length = 3899 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RLQAAVEK 9 RLQAAVEK Sbjct: 1849 RLQAAVEK 1856>XP_006715890 Length = 3860 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RLQAAVEK 9 RLQAAVEK Sbjct: 1802 RLQAAVEK 1809>XP_005250160 Length = 3939 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RLQAAVEK 9 RLQAAVEK Sbjct: 1881 RLQAAVEK 1888>XP_005250159 Length = 3952 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RLQAAVEK 9 RLQAAVEK Sbjct: 1881 RLQAAVEK 1888>NP_060004 Length = 1941 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 CRLQAAVEK 9 C LQAA+E+ Sbjct: 1544 CELQAALEE 1552>NP_001093582 Length = 1941 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 CRLQAAVEK 9 C LQAA+E+ Sbjct: 1544 CELQAALEE 1552>NP_004865 Length = 457 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CRLQAAVEK 9 C++QA +EK Sbjct: 443 CKIQAILEK 451>NP_001191807 Length = 421 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CRLQAAVEK 9 C++QA +EK Sbjct: 407 CKIQAILEK 415>NP_004578 Length = 977 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 CRLQ +EK Sbjct: 890 CRLQEELEK 898>NP_001036041 Length = 977 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 CRLQ +EK Sbjct: 890 CRLQEELEK 898>NP_001092903 Length = 831 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQAAVEK 9 LQAAVEK Sbjct: 758 LQAAVEK 764>NP_002463 Length = 1937 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CRLQAAVEK 9 C +QAA+E+ Sbjct: 1541 CEIQAALEE 1549>NP_149022 Length = 513 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 CRLQAAVE 8 C LQAA+E Sbjct: 195 CSLQAALE 202>NP_775820 Length = 374 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LQAAVEK 9 LQAAVEK Sbjct: 161 LQAAVEK 167>XP_005273630 Length = 205 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 RLQA VEK Sbjct: 89 RLQAKVEK 96>NP_061158 Length = 253 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 RLQA VEK Sbjct: 137 RLQAKVEK 144>NP_001157718 Length = 422 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 C+L AVEK Sbjct: 77 CQLMFAVEK 85>NP_004378 Length = 324 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CRLQAAVE 8 C LQ AVE Sbjct: 114 CALQKAVE 121>NP_001128669 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 RLQ +VEK Sbjct: 148 RLQTSVEK 155>NP_055510 Length = 1427 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRLQAAV 7 CRL AAV Sbjct: 918 CRLAAAV 924>XP_005256934 Length = 1434 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRLQAAV 7 CRL AAV Sbjct: 918 CRLAAAV 924>XP_006721670 Length = 1471 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRLQAAV 7 CRL AAV Sbjct: 918 CRLAAAV 924>XP_005265877 Length = 286 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CRLQAAVE 8 C LQ AVE Sbjct: 76 CALQKAVE 83>XP_005265157 Length = 577 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 RLQ +VEK Sbjct: 131 RLQTSVEK 138>XP_005265156 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 RLQ +VEK Sbjct: 148 RLQTSVEK 155>XP_006713187 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 RLQ +VEK Sbjct: 148 RLQTSVEK 155>NP_835467 Length = 594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 RLQ +VEK Sbjct: 148 RLQTSVEK 155>NP_060626 Length = 4363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 CRL+ VE+ Sbjct: 2205 CRLKLQVER 2213>NP_056193 Length = 4388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 CRL+ VE+ Sbjct: 2205 CRLKLQVER 2213>NP_060921 Length = 1338 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CRLQAAVEK 9 C+++ AV+K Sbjct: 672 CKIRKAVQK 680>NP_066564 Length = 837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 CR +A+EK Sbjct: 815 CRCASALEK 823>NP_001274359 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRLQAAV 7 C LQAAV Sbjct: 124 CGLQAAV 130>NP_001185980 Length = 140 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 C+LQ +EK Sbjct: 10 CKLQNQLEK 18>NP_001268369 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQAAVEK 9 LQAAV+K Sbjct: 145 LQAAVDK 151>NP_001001552 Length = 108 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 C+LQ +EK Sbjct: 10 CKLQNQLEK 18>NP_057531 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 +LQ A+EK Sbjct: 519 KLQTAIEK 526>NP_001274355 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRLQAAV 7 C LQAAV Sbjct: 261 CGLQAAV 267>NP_001274358 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRLQAAV 7 C LQAAV Sbjct: 124 CGLQAAV 130>NP_003355 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRLQAAV 7 C LQAAV Sbjct: 261 CGLQAAV 267>NP_001274357 Length = 173 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRLQAAV 7 C LQAAV Sbjct: 124 CGLQAAV 130>NP_001037770 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQAAVEK 9 LQAAV+K Sbjct: 155 LQAAVDK 161>NP_001185979 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 C+LQ +EK Sbjct: 10 CKLQNQLEK 18>NP_001185981 Length = 67 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 C+LQ +EK Sbjct: 10 CKLQNQLEK 18>XP_006721881 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 CR +A+EK Sbjct: 455 CRCASALEK 463>XP_006721880 Length = 838 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 CR +A+EK Sbjct: 816 CRCASALEK 824>XP_005249895 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRLQAAV 7 C LQAAV Sbjct: 197 CGLQAAV 203>XP_005249832 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 +LQ A+EK Sbjct: 407 KLQTAIEK 414>XP_006715803 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 +LQ A+EK Sbjct: 519 KLQTAIEK 526>XP_006715802 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 +LQ A+EK Sbjct: 519 KLQTAIEK 526>XP_006715801 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RLQAAVEK 9 +LQ A+EK Sbjct: 519 KLQTAIEK 526>XP_005248817 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQAAVEK 9 LQAAV+K Sbjct: 155 LQAAVDK 161>XP_006715610 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LQAAVEK 9 LQAAV+K Sbjct: 155 LQAAVDK 161>XP_006711695 Length = 181 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRLQAAVEK 9 C+LQ +EK Sbjct: 10 CKLQNQLEK 18Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.127 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 393,074 Number of extensions: 726 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |