Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 20 390 NP_001017408 17 4312 NP_065132 17 4312 NP_001006608 16 5631 NP_955372 16 5631 NP_055649 16 5631 XP_006725346 16 5631 XP_005275722 16 5631 XP_005275721 16 5631 XP_006725344 16 5631 XP_006725343 16 5631 XP_006725342 16 5631 XP_005275717 16 5631 XP_005257944 16 5631 XP_005257941 16 5631 XP_005257940 16 5631 XP_005257939 16 5631 XP_006722272 16 5631 XP_005257937 16 5631 XP_005257936 16 5631 XP_006722271 16 5631 NP_004612 16 7355 NP_003296 16 7355 NP_001124170 16 7355 NP_006315 16 7355 XP_006724409 16 7355 XP_005261851 16 7355 XP_005261850 16 7355 XP_006718961 16 7355 XP_006714359 16 7355 XP_006714358 16 7355 NP_001138678 16 7355 NP_004870 15 9605 NP_001277064 15 9605 NP_149094 15 9605 NP_055990 15 9605 NP_001138740 15 9605 NP_065122 15 9605 XP_006725506 15 9605 XP_006715959 15 9605 XP_005265049 15 9605 XP_006713135 15 9605 NP_001135389 15 9605>NP_004351 Length = 882 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CRKAQSVEA 9 CRKAQ VEA Sbjct: 695 CRKAQPVEA 703>NP_001017408 Length = 454 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRKAQSV 7 C KAQSV Sbjct: 81 CHKAQSV 87>NP_065132 Length = 462 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CRKAQSV 7 C KAQSV Sbjct: 81 CHKAQSV 87>NP_001006608 Length = 1700 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>NP_955372 Length = 1634 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>NP_055649 Length = 1700 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_006725346 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 61 CNKIQSIE 68>XP_005275722 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_005275721 Length = 1018 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_006725344 Length = 1606 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 828 CNKIQSIE 835>XP_006725343 Length = 1635 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_006725342 Length = 1651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_005275717 Length = 1665 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_005257944 Length = 839 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 61 CNKIQSIE 68>XP_005257941 Length = 969 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_005257940 Length = 1018 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_005257939 Length = 1606 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 828 CNKIQSIE 835>XP_006722272 Length = 1635 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_005257937 Length = 1651 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_005257936 Length = 1665 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>XP_006722271 Length = 1700 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 922 CNKIQSIE 929>NP_004612 Length = 931 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CRKAQSVEA 9 CR + VEA Sbjct: 336 CRNTEEVEA 344>NP_003296 Length = 848 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRKAQSVEA 9 CR ++ VEA Sbjct: 277 CRDSEEVEA 285>NP_001124170 Length = 921 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRKAQSVEA 9 CR ++ VEA Sbjct: 350 CRDSEEVEA 358>NP_006315 Length = 299 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RKAQSVEA 9 RKAQS+ A Sbjct: 53 RKAQSIPA 60>XP_006724409 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CRKAQSVEA 9 CR SVEA Sbjct: 585 CRGGSSVEA 593>XP_005261851 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CRKAQSVEA 9 CR SVEA Sbjct: 585 CRGGSSVEA 593>XP_005261850 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CRKAQSVEA 9 CR SVEA Sbjct: 585 CRGGSSVEA 593>XP_006718961 Length = 906 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CRKAQSVEA 9 CR + VEA Sbjct: 336 CRNTEEVEA 344>XP_006714359 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRKAQSVEA 9 CR ++ VEA Sbjct: 277 CRDSEEVEA 285>XP_006714358 Length = 820 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRKAQSVEA 9 CR ++ VEA Sbjct: 277 CRDSEEVEA 285>NP_001138678 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CRKAQSVEA 9 CR SVEA Sbjct: 585 CRGGSSVEA 593>NP_004870 Length = 340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RKAQSVE 8 R+AQS+E Sbjct: 52 RRAQSIE 58>NP_001277064 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 RKAQSVE 8 R+AQS+E Sbjct: 38 RRAQSIE 44>NP_149094 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CRKAQSVE 8 C+K +S+E Sbjct: 430 CKKLRSIE 437>NP_055990 Length = 2754 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CRKAQSVEA 9 CR +++EA Sbjct: 89 CRNLENIEA 97>NP_001138740 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 161 CVKVQSIE 168>NP_065122 Length = 862 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CRKAQSVEA 9 CR + VEA Sbjct: 281 CRDTEEVEA 289>XP_006725506 Length = 250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CRKAQSVEA 9 CR +QSV + Sbjct: 141 CRASQSVSS 149>XP_006715959 Length = 385 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C K QS+E Sbjct: 161 CVKVQSIE 168>XP_005265049 Length = 2720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CRKAQSVEA 9 CR +++EA Sbjct: 82 CRNLENIEA 90>XP_006713135 Length = 2727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CRKAQSVEA 9 CR +++EA Sbjct: 89 CRNLENIEA 97>NP_001135389 Length = 1335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CRKAQSVE 8 C KAQS E Sbjct: 556 CGKAQSPE 563Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.114 0.318 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 319,640 Number of extensions: 286 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |