Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_150241 18 1482 XP_006712559 17 3301 NP_072088 17 3301 NP_062819 16 5631 NP_000869 16 7355 NP_001243778 16 7355 NP_002682 16 7355 NP_001265478 16 7355 NP_002601 16 7355 NP_001266282 16 7355 NP_001266284 16 7355 NP_009190 16 7355 NP_001266283 16 7355 XP_005259065 16 7355 XP_006723311 16 7355 XP_005259064 16 7355 XP_005259063 16 7355 XP_006719746 16 7355 XP_005253685 16 7355 XP_005253684 16 7355 XP_006712658 16 7355 XP_006712657 16 7355 XP_006711205 16 7355 NP_003950 16 7355 NP_940980 15 9605 NP_001034930 15 9605 NP_001273409 15 9605 NP_055598 15 9605 NP_061940 15 9605 NP_001171748 15 9605 NP_079034 15 9605 NP_078886 15 9605 NP_002635 15 9605 NP_056137 15 9605 NP_031363 15 9605 NP_031361 15 9605 NP_115548 15 9605 NP_955389 15 9605 NP_001273408 15 9605 XP_006725628 15 9605 XP_006725627 15 9605 XP_005255358 15 9605 XP_005255357 15 9605 XP_005255356 15 9605 XP_005255355 15 9605 XP_006720851 15 9605 XP_005254865 15 9605 XP_005268686 15 9605 XP_005249939 15 9605 XP_005247818 15 9605 XP_006713504 15 9605 XP_006713503 15 9605 XP_005265688 15 9605 XP_006713502 15 9605 XP_006713501 15 9605 XP_006713500 15 9605 XP_005265687 15 9605 XP_006712096 15 9605 XP_005264430 15 9605 XP_006712093 15 9605 XP_005264429 15 9605 XP_005273220 15 9605 NP_001138483 15 9605 NP_060022 15 9605 NP_001229267 15 9605>NP_150241 Length = 882 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 C LLEVS G Sbjct: 754 CRLLEVSPG 762>XP_006712559 Length = 191 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 CN L +SQG Sbjct: 6 CNSLTLSQG 14>NP_072088 Length = 362 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LLEVSQG 9 LLEVSQG Sbjct: 180 LLEVSQG 186>NP_062819 Length = 109 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 CNLL S+G Sbjct: 78 CNLLIKSEG 86>NP_000869 Length = 551 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CNLLEVSQ 8 C LL VSQ Sbjct: 74 CELLPVSQ 81>NP_001243778 Length = 1107 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CNLLEVSQ 8 CN +++SQ Sbjct: 873 CNRIDISQ 880>NP_002682 Length = 1107 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CNLLEVSQ 8 CN +++SQ Sbjct: 873 CNRIDISQ 880>NP_001265478 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CNLLEV 6 CN+LEV Sbjct: 243 CNVLEV 248>NP_002601 Length = 436 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CNLLEV 6 CN+LEV Sbjct: 223 CNVLEV 228>NP_001266282 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLEVSQ 8 NLLEVS+ Sbjct: 241 NLLEVSE 247>NP_001266284 Length = 447 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLEVSQ 8 NLLEVS+ Sbjct: 223 NLLEVSE 229>NP_009190 Length = 570 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLEVSQ 8 NLLEVS+ Sbjct: 346 NLLEVSE 352>NP_001266283 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLEVSQ 8 NLLEVS+ Sbjct: 310 NLLEVSE 316>XP_005259065 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CNLLEVSQ 8 CN +++SQ Sbjct: 849 CNRIDISQ 856>XP_006723311 Length = 1109 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CNLLEVSQ 8 CN +++SQ Sbjct: 875 CNRIDISQ 882>XP_005259064 Length = 1133 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CNLLEVSQ 8 CN +++SQ Sbjct: 899 CNRIDISQ 906>XP_005259063 Length = 1133 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CNLLEVSQ 8 CN +++SQ Sbjct: 899 CNRIDISQ 906>XP_006719746 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NL+E+S G Sbjct: 305 NLIEISTG 312>XP_005253685 Length = 1061 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NL+E+S G Sbjct: 305 NLIEISTG 312>XP_005253684 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NL+E+S G Sbjct: 317 NLIEISTG 324>XP_006712658 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CNLLEV 6 CN+LEV Sbjct: 31 CNVLEV 36>XP_006712657 Length = 281 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CNLLEV 6 CN+LEV Sbjct: 243 CNVLEV 248>XP_006711205 Length = 503 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 NLLEVSQ 8 NLLEVS+ Sbjct: 346 NLLEVSE 352>NP_003950 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NL+E+S G Sbjct: 317 NLIEISTG 324>NP_940980 Length = 2527 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CNLLEVSQG 9 C L+EV G Sbjct: 86 CKLIEVCPG 94>NP_001034930 Length = 267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NLL+ S+G Sbjct: 202 NLLQTSEG 209>NP_001273409 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NLL+ S+G Sbjct: 13 NLLQTSEG 20>NP_055598 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NLL+ S+G Sbjct: 202 NLLQTSEG 209>NP_061940 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CNLLEVS 7 CNL E+S Sbjct: 342 CNLEEIS 348>NP_001171748 Length = 582 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CNLLEVS 7 CNL E+S Sbjct: 342 CNLEEIS 348>NP_079034 Length = 352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 CNLLEVS 7 C+L+EVS Sbjct: 316 CDLVEVS 322>NP_078886 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CNLLEVSQ 8 CN +EV Q Sbjct: 362 CNHMEVGQ 369>NP_002635 Length = 764 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LEVSQG 9 LEVSQG Sbjct: 125 LEVSQG 130>NP_056137 Length = 627 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CNLLEVSQ 8 C++LE+ Q Sbjct: 413 CSVLEIEQ 420>NP_031363 Length = 1778 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 C+++EV G Sbjct: 799 CHIIEVEPG 807>NP_031361 Length = 1755 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 C+++EV G Sbjct: 799 CHIIEVEPG 807>NP_115548 Length = 1316 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 CNLLEVSQG 9 C L E QG Sbjct: 1307 CRLFEYGQG 1315>NP_955389 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NLL+ S+G Sbjct: 202 NLLQTSEG 209>NP_001273408 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NLL+ S+G Sbjct: 13 NLLQTSEG 20>XP_006725628 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NLL+ S+G Sbjct: 202 NLLQTSEG 209>XP_006725627 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NLL+ S+G Sbjct: 202 NLLQTSEG 209>XP_005255358 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLEVSQG 9 LLE SQG Sbjct: 107 LLEASQG 113>XP_005255357 Length = 1112 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLEVSQG 9 LLE SQG Sbjct: 107 LLEASQG 113>XP_005255356 Length = 1114 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLEVSQG 9 LLE SQG Sbjct: 107 LLEASQG 113>XP_005255355 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLEVSQG 9 LLE SQG Sbjct: 107 LLEASQG 113>XP_006720851 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NLL+ S+G Sbjct: 13 NLLQTSEG 20>XP_005254865 Length = 994 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLLEVSQG 9 NLL+ S+G Sbjct: 202 NLLQTSEG 209>XP_005268686 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CNLLEVSQG 9 C L+EV G Sbjct: 86 CKLIEVCPG 94>XP_005249939 Length = 1324 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 CNLLEVSQG 9 C L E QG Sbjct: 1307 CRLFEYGQG 1315>XP_005247818 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CNLLEVSQ 8 CN +EV Q Sbjct: 334 CNHMEVGQ 341>XP_006713504 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 C+++EV G Sbjct: 96 CHIIEVEPG 104>XP_006713503 Length = 1438 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 C+++EV G Sbjct: 799 CHIIEVEPG 807>XP_005265688 Length = 1480 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 C+++EV G Sbjct: 498 CHIIEVEPG 506>XP_006713502 Length = 1578 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 C+++EV G Sbjct: 799 CHIIEVEPG 807>XP_006713501 Length = 1727 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 C+++EV G Sbjct: 799 CHIIEVEPG 807>XP_006713500 Length = 1746 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 C+++EV G Sbjct: 799 CHIIEVEPG 807>XP_005265687 Length = 1758 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CNLLEVSQG 9 C+++EV G Sbjct: 799 CHIIEVEPG 807>XP_006712096 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CNLLEVSQG 9 C+++++ QG Sbjct: 554 CDIMDLDQG 562>XP_005264430 Length = 1044 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CNLLEVSQG 9 C+++++ QG Sbjct: 796 CDIMDLDQG 804>XP_006712093 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CNLLEVSQG 9 C+++++ QG Sbjct: 1224 CDIMDLDQG 1232>XP_005264429 Length = 1472 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CNLLEVSQG 9 C+++++ QG Sbjct: 1224 CDIMDLDQG 1232>XP_005273220 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LEVSQG 9 LEVSQG Sbjct: 125 LEVSQG 130>NP_001138483 Length = 1141 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LLEVSQG 9 LLE SQG Sbjct: 107 LLEASQG 113>NP_060022 Length = 1458 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CNLLEVSQG 9 C+++++ QG Sbjct: 1210 CDIMDLDQG 1218>NP_001229267 Length = 1453 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CNLLEVSQG 9 C+++++ QG Sbjct: 1205 CDIMDLDQG 1213Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 476,189 Number of extensions: 871 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |