Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_060501 17 3301 NP_000284 17 4312 NP_001027005 17 4312 NP_002970 17 4312 NP_001007099 17 4312 NP_001180528 17 4312 NP_001180529 17 4312 NP_001180546 17 4312 XP_005256041 17 4312 XP_005256040 17 4312 XP_005271161 17 4312 XP_005271160 17 4312 NP_000531 16 5631 NP_000208 16 5631 NP_001036188 16 5631 NP_003238 16 5631 XP_006723382 16 5631 XP_006723381 16 5631 XP_006723380 16 5631 NP_001026 16 7355 NP_001129131 16 7355 NP_001275913 16 7355 NP_060585 16 7355 NP_079335 16 7355 NP_001275912 16 7355 XP_006715631 16 7355 XP_005263162 16 7355 XP_005263159 16 7355 XP_006711873 16 7355 XP_006711872 16 7355 XP_006711871 16 7355 XP_006711870 16 7355 XP_006711869 16 7355 XP_006711868 16 7355 XP_006711867 16 7355 XP_006711866 16 7355 XP_006711865 16 7355 NP_597677 15 9605 NP_056199 15 9605 NP_060136 15 9605 XP_006724828 15 9605 XP_005248340 15 9605 XP_005248339 15 9605 XP_005248337 15 9605 XP_006714531 15 9605 XP_006714530 15 9605>NP_060501 Length = 1151 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 CLSTSKI 7 CLSTS+I Sbjct: 23 CLSTSRI 29>NP_000284 Length = 1093 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CLSTSKI 7 CL TSKI Sbjct: 559 CLGTSKI 565>NP_001027005 Length = 1086 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CLSTSKI 7 CL TSKI Sbjct: 552 CLGTSKI 558>NP_002970 Length = 547 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 C ST+++LT Sbjct: 307 CFSTNELLT 315>NP_001007099 Length = 322 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 C ST+++LT Sbjct: 263 CFSTNELLT 271>NP_001180528 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 C ST+++LT Sbjct: 283 CFSTNELLT 291>NP_001180529 Length = 503 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 C ST+++LT Sbjct: 263 CFSTNELLT 271>NP_001180546 Length = 466 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 C ST+++LT Sbjct: 226 CFSTNELLT 234>XP_005256041 Length = 1086 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CLSTSKI 7 CL TSKI Sbjct: 552 CLGTSKI 558>XP_005256040 Length = 1093 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CLSTSKI 7 CL TSKI Sbjct: 559 CLGTSKI 565>XP_005271161 Length = 366 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 C ST+++LT Sbjct: 307 CFSTNELLT 315>XP_005271160 Length = 463 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 C ST+++LT Sbjct: 307 CFSTNELLT 315>NP_000531 Length = 5038 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 CL+TS+ +T Sbjct: 119 CLTTSRSMT 127>NP_000208 Length = 495 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 C++ SK+LT Sbjct: 485 CVNKSKLLT 493>NP_001036188 Length = 5033 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 CL+TS+ +T Sbjct: 119 CLTTSRSMT 127>NP_003238 Length = 1172 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLSTSKI 7 C STSK+ Sbjct: 601 CFSTSKV 607>XP_006723382 Length = 5027 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 CL+TS+ +T Sbjct: 119 CLTTSRSMT 127>XP_006723381 Length = 5031 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 CL+TS+ +T Sbjct: 119 CLTTSRSMT 127>XP_006723380 Length = 5032 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 CL+TS+ +T Sbjct: 119 CLTTSRSMT 127>NP_001026 Length = 4967 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CLSTS+ T Sbjct: 132 CLSTSRSST 140>NP_001129131 Length = 1547 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLSTSKILT 9 C++T+K LT Sbjct: 281 CINTAKPLT 289>NP_001275913 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSTSKILT 9 +STS++LT Sbjct: 448 ISTSRVLT 455>NP_060585 Length = 687 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSTSKILT 9 +STS++LT Sbjct: 545 ISTSRVLT 552>NP_079335 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSTSKILT 9 LSTSKI T Sbjct: 115 LSTSKIRT 122>NP_001275912 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSTSKILT 9 +STS++LT Sbjct: 508 ISTSRVLT 515>XP_006715631 Length = 648 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LSTSKILT 9 LSTSKI T Sbjct: 115 LSTSKIRT 122>XP_005263162 Length = 590 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSTSKILT 9 +STS++LT Sbjct: 448 ISTSRVLT 455>XP_005263159 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LSTSKILT 9 +STS++LT Sbjct: 520 ISTSRVLT 527>XP_006711873 Length = 4954 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CLSTS+ T Sbjct: 132 CLSTSRSST 140>XP_006711872 Length = 2735 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CLSTS+ T Sbjct: 132 CLSTSRSST 140>XP_006711871 Length = 4906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CLSTS+ T Sbjct: 132 CLSTSRSST 140>XP_006711870 Length = 4965 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CLSTS+ T Sbjct: 132 CLSTSRSST 140>XP_006711869 Length = 4973 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CLSTS+ T Sbjct: 132 CLSTSRSST 140>XP_006711868 Length = 4975 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CLSTS+ T Sbjct: 132 CLSTSRSST 140>XP_006711867 Length = 4977 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CLSTS+ T Sbjct: 132 CLSTSRSST 140>XP_006711866 Length = 4984 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CLSTS+ T Sbjct: 132 CLSTSRSST 140>XP_006711865 Length = 4985 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CLSTS+ T Sbjct: 132 CLSTSRSST 140>NP_597677 Length = 2804 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CL+T I+T Sbjct: 1311 CLTTINIMT 1319>NP_056199 Length = 2697 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CL+T I+T Sbjct: 1311 CLTTINIMT 1319>NP_060136 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLSTSKIL 8 C S SK+L Sbjct: 318 CFSCSKVL 325>XP_006724828 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLSTSKIL 8 C S SK+L Sbjct: 318 CFSCSKVL 325>XP_005248340 Length = 2265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CL+T I+T Sbjct: 772 CLTTINIMT 780>XP_005248339 Length = 2584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CL+T I+T Sbjct: 1091 CLTTINIMT 1099>XP_005248337 Length = 2698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CL+T I+T Sbjct: 1311 CLTTINIMT 1319>XP_006714531 Length = 2738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CL+T I+T Sbjct: 1245 CLTTINIMT 1253>XP_006714530 Length = 2755 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLSTSKILT 9 CL+T I+T Sbjct: 1311 CLTTINIMT 1319Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.124 0.349 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 436,459 Number of extensions: 785 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |