Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_689637 17 4312 NP_001107 17 4312 NP_573400 17 4312 NP_001026908 17 4312 XP_005262298 17 4312 XP_006723752 17 4312 XP_006723751 17 4312 XP_006723750 17 4312 XP_006723749 17 4312 XP_006723748 17 4312 XP_005255136 17 4312 XP_006711995 17 4312 XP_006711994 17 4312 XP_006711993 17 4312 NP_036336 17 4312 NP_001129107 16 5631 NP_113638 16 5631 NP_002323 16 7355 NP_000378 16 7355 NP_005609 16 7355 NP_940961 16 7355 XP_006725077 16 7355 XP_005266991 16 7355 XP_006713390 16 7355 XP_005246598 16 7355 XP_005246596 16 7355 NP_001035304 15 9605 NP_060597 15 9605 NP_001159434 15 9605 NP_776065 15 9605 NP_001127808 15 9605 NP_065755 15 9605 XP_006723721 15 9605 XP_006723720 15 9605 XP_006716133 15 9605 XP_006716132 15 9605 XP_005266891 15 9605 XP_005266890 15 9605 XP_006715232 15 9605 XP_005249381 15 9605 XP_005249380 15 9605 XP_005249379 15 9605 XP_005249377 15 9605 XP_005249376 15 9605 XP_005249375 15 9605 XP_005249374 15 9605 XP_005249373 15 9605 XP_005249372 15 9605 XP_005249371 15 9605 XP_005249370 15 9605 XP_005249369 15 9605 XP_005249368 15 9605 XP_005249367 15 9605 NP_008955 15 9605 NP_002277 15 9605>NP_689637 Length = 1135 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLLTYQ 6 CL+TYQ Sbjct: 361 CLVTYQ 366>NP_001107 Length = 1353 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 C L Y+A+T Sbjct: 805 CFLKYEAAT 813>NP_573400 Length = 1460 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 CLLT AST Sbjct: 740 CLLTTGAST 748>NP_001026908 Length = 271 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 C L+YQ +T Sbjct: 159 CALSYQGAT 167>XP_005262298 Length = 858 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLLTYQ 6 CL+TYQ Sbjct: 84 CLVTYQ 89>XP_006723752 Length = 1387 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 CLLT AST Sbjct: 677 CLLTTGAST 685>XP_006723751 Length = 1427 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 CLLT AST Sbjct: 666 CLLTTGAST 674>XP_006723750 Length = 1427 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 CLLT AST Sbjct: 666 CLLTTGAST 674>XP_006723749 Length = 1428 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 CLLT AST Sbjct: 677 CLLTTGAST 685>XP_006723748 Length = 1437 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 CLLT AST Sbjct: 677 CLLTTGAST 685>XP_005255136 Length = 1372 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 C L Y+A+T Sbjct: 824 CFLKYEAAT 832>XP_006711995 Length = 218 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 C L+YQ +T Sbjct: 106 CALSYQGAT 114>XP_006711994 Length = 271 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 C L+YQ +T Sbjct: 159 CALSYQGAT 167>XP_006711993 Length = 271 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 C L+YQ +T Sbjct: 159 CALSYQGAT 167>NP_036336 Length = 822 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLLTYQA 7 C LTYQ+ Sbjct: 773 CFLTYQS 779>NP_001129107 Length = 293 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLLTYQ 6 CLLTY+ Sbjct: 241 CLLTYK 246>NP_113638 Length = 292 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLLTYQ 6 CLLTY+ Sbjct: 240 CLLTYK 245>NP_002323 Length = 4544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLLTYQ 6 CLLT+Q Sbjct: 2493 CLLTHQ 2498>NP_000378 Length = 301 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 CLL QAS+ Sbjct: 136 CLLQIQASS 144>NP_005609 Length = 723 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CLLTYQAS 8 CL YQAS Sbjct: 63 CLKHYQAS 70>NP_940961 Length = 387 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CLLTYQ 6 C LTYQ Sbjct: 206 CYLTYQ 211>XP_006725077 Length = 524 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CLLTYQAS 8 CL YQAS Sbjct: 63 CLKHYQAS 70>XP_005266991 Length = 524 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CLLTYQAS 8 CL YQAS Sbjct: 63 CLKHYQAS 70>XP_006713390 Length = 184 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 CLL QAS+ Sbjct: 136 CLLQIQASS 144>XP_005246598 Length = 289 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CLLTYQ 6 C LTYQ Sbjct: 108 CYLTYQ 113>XP_005246596 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CLLTYQ 6 C LTYQ Sbjct: 175 CYLTYQ 180>NP_001035304 Length = 208 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CLLTYQ 6 CLL YQ Sbjct: 139 CLLEYQ 144>NP_060597 Length = 826 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CLLTYQ 6 CLL YQ Sbjct: 421 CLLKYQ 426>NP_001159434 Length = 786 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CLLTYQ 6 CLL YQ Sbjct: 381 CLLKYQ 386>NP_776065 Length = 825 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CLLTYQ 6 CLL YQ Sbjct: 420 CLLKYQ 425>NP_001127808 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 CLLTYQAST 9 C L YQ T Sbjct: 156 CFLLYQMGT 164>NP_065755 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 CLLTYQAST 9 C L YQ T Sbjct: 156 CFLLYQMGT 164>XP_006723721 Length = 521 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 C++ YQ S+ Sbjct: 484 CMMPYQQSS 492>XP_006723720 Length = 739 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CLLTYQAST 9 C++ YQ S+ Sbjct: 702 CMMPYQQSS 710>XP_006716133 Length = 535 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 CLLTYQAST 9 C L YQ T Sbjct: 156 CFLLYQMGT 164>XP_006716132 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 CLLTYQAST 9 C L YQ T Sbjct: 156 CFLLYQMGT 164>XP_005266891 Length = 190 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CLLTYQ 6 CLL YQ Sbjct: 139 CLLEYQ 144>XP_005266890 Length = 207 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CLLTYQ 6 CLL YQ Sbjct: 138 CLLEYQ 143>XP_006715232 Length = 7498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 1813 ILTYQVQT 1820>XP_005249381 Length = 7281 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 1487 ILTYQVQT 1494>XP_005249380 Length = 7607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 1813 ILTYQVQT 1820>XP_005249379 Length = 7633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 1839 ILTYQVQT 1846>XP_005249377 Length = 7640 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 1846 ILTYQVQT 1853>XP_005249376 Length = 7647 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 1853 ILTYQVQT 1860>XP_005249375 Length = 7680 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 1886 ILTYQVQT 1893>XP_005249374 Length = 7709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 2024 ILTYQVQT 2031>XP_005249373 Length = 7723 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 1929 ILTYQVQT 1936>XP_005249372 Length = 7785 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 1991 ILTYQVQT 1998>XP_005249371 Length = 7788 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 2024 ILTYQVQT 2031>XP_005249370 Length = 7794 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 2024 ILTYQVQT 2031>XP_005249369 Length = 7797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 2003 ILTYQVQT 2010>XP_005249368 Length = 7812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 2024 ILTYQVQT 2031>XP_005249367 Length = 7818 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 LLTYQAST 9 +LTYQ T Sbjct: 2024 ILTYQVQT 2031>NP_008955 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLTYQAS 8 LLTY AS Sbjct: 118 LLTYMAS 124>NP_002277 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CLLTYQ 6 C+LTY+ Sbjct: 241 CILTYR 246Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.124 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 465,874 Number of extensions: 753 Number of successful extensions: 55 Number of sequences better than 10000.0: 55 Number of HSP's gapped: 55 Number of HSP's successfully gapped: 55 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |