Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001129119 16 5631 NP_057689 16 5631 NP_982271 16 5631 NP_001271230 16 5631 NP_001153774 16 5631 NP_001271231 16 5631 NP_003886 16 5631 NP_061155 16 5631 NP_001153778 16 5631 XP_005261137 16 5631 XP_006724126 16 5631 XP_006724125 16 5631 XP_006724124 16 5631 XP_005261133 16 5631 XP_006724123 16 5631 XP_006724122 16 5631 XP_006724121 16 5631 XP_006715810 16 5631 XP_006715809 16 5631 NP_148934 16 7355 NP_071285 16 7355 NP_003880 16 7355 NP_058628 16 7355 XP_005264157 16 7355 NP_001243143 15 9605 NP_689509 15 9605 NP_001243142 15 9605 NP_060209 15 9605 NP_001277059 15 9605 NP_001277058 15 9605 NP_008832 15 9605 NP_079067 15 9605 NP_001161940 15 9605 NP_001275701 15 9605 NP_004561 15 9605 NP_001230695 15 9605 NP_001275703 15 9605 XP_005259010 15 9605 XP_005258481 15 9605 XP_006720604 15 9605 XP_005254461 15 9605 XP_006720603 15 9605 XP_006720602 15 9605 XP_005253450 15 9605 XP_006719151 15 9605 XP_006710819 15 9605 XP_006710818 15 9605 XP_005271067 15 9605>NP_001129119 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 CLKDTAR 7 CL++TAR Sbjct: 315 CLQETAR 321>NP_057689 Length = 392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 CLKDTAR 7 CL++TAR Sbjct: 315 CLQETAR 321>NP_982271 Length = 1350 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 491 LKDGARSV 498>NP_001271230 Length = 1087 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKDTARS 8 LKDT+RS Sbjct: 596 LKDTSRS 602>NP_001153774 Length = 1295 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 452 LKDGARSV 459>NP_001271231 Length = 1086 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKDTARS 8 LKDT+RS Sbjct: 595 LKDTSRS 601>NP_003886 Length = 1612 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 491 LKDGARSV 498>NP_061155 Length = 1124 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKDTARS 8 LKDT+RS Sbjct: 633 LKDTSRS 639>NP_001153778 Length = 1526 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 455 LKDGARSV 462>XP_005261137 Length = 1264 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 455 LKDGARSV 462>XP_006724126 Length = 1313 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 455 LKDGARSV 462>XP_006724125 Length = 1313 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 455 LKDGARSV 462>XP_006724124 Length = 1534 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 455 LKDGARSV 462>XP_005261133 Length = 1557 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 452 LKDGARSV 459>XP_006724123 Length = 1560 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 455 LKDGARSV 462>XP_006724122 Length = 1568 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 455 LKDGARSV 462>XP_006724121 Length = 1576 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LKD ARSV Sbjct: 455 LKDGARSV 462>XP_006715810 Length = 1105 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKDTARS 8 LKDT+RS Sbjct: 596 LKDTSRS 602>XP_006715809 Length = 1142 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LKDTARS 8 LKDT+RS Sbjct: 633 LKDTSRS 639>NP_148934 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLKDTA 6 CL+DTA Sbjct: 270 CLEDTA 275>NP_071285 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLKDTA 6 CL+DTA Sbjct: 346 CLEDTA 351>NP_003880 Length = 434 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLKDTA 6 CL+DTA Sbjct: 307 CLEDTA 312>NP_058628 Length = 291 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLKDTARSV 9 C K+ +RSV Sbjct: 130 CFKEKSRSV 138>XP_005264157 Length = 293 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLKDTARSV 9 C K+ +RSV Sbjct: 130 CFKEKSRSV 138>NP_001243143 Length = 1026 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLKDTARSV 9 C++ TAR V Sbjct: 252 CVEGTARGV 260>NP_689509 Length = 1013 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLKDTARSV 9 C++ TAR V Sbjct: 239 CVEGTARGV 247>NP_001243142 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLKDTARSV 9 C++ TAR V Sbjct: 250 CVEGTARGV 258>NP_060209 Length = 660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LKDTARSV 9 LKDTA+++ Sbjct: 185 LKDTAKAL 192>NP_001277059 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LKDTARSV 9 LKDTA+++ Sbjct: 42 LKDTAKAL 49>NP_001277058 Length = 638 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LKDTARSV 9 LKDTA+++ Sbjct: 163 LKDTAKAL 170>NP_008832 Length = 2548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLKDTAR 7 CLK TA+ Sbjct: 2041 CLKTTAK 2047>NP_079067 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLKDTARSV 9 CLK ARS+ Sbjct: 461 CLKLAARSL 469>NP_001161940 Length = 505 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLKDTARSV 9 CLK ARS+ Sbjct: 475 CLKLAARSL 483>NP_001275701 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CLKDTARSV 9 CL T RS+ Sbjct: 1238 CLLSTTRSI 1246>NP_004561 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CLKDTARSV 9 CL T RS+ Sbjct: 1197 CLLSTTRSI 1205>NP_001230695 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LKDTARSV 9 LKDTA+++ Sbjct: 185 LKDTAKAL 192>NP_001275703 Length = 1264 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CLKDTARSV 9 CL T RS+ Sbjct: 1016 CLLSTTRSI 1024>XP_005259010 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLKDTARSV 9 C++ TAR V Sbjct: 239 CVEGTARGV 247>XP_005258481 Length = 898 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LKDTARSV 9 LK+T RS+ Sbjct: 48 LKETGRSI 55>XP_006720604 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLKDTAR 7 CLK TA+ Sbjct: 1170 CLKTTAK 1176>XP_005254461 Length = 2600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLKDTAR 7 CLK TA+ Sbjct: 2093 CLKTTAK 2099>XP_006720603 Length = 2619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLKDTAR 7 CLK TA+ Sbjct: 2112 CLKTTAK 2118>XP_006720602 Length = 2619 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLKDTAR 7 CLK TA+ Sbjct: 2112 CLKTTAK 2118>XP_005253450 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CLKDTARSV 9 CL T RS+ Sbjct: 1238 CLLSTTRSI 1246>XP_006719151 Length = 1486 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CLKDTARSV 9 CL T RS+ Sbjct: 1238 CLLSTTRSI 1246>XP_006710819 Length = 748 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LKDTARSV 9 LKDTA+++ Sbjct: 185 LKDTAKAL 192>XP_006710818 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LKDTARSV 9 LKDTA+++ Sbjct: 185 LKDTAKAL 192>XP_005271067 Length = 718 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LKDTARSV 9 LKDTA+++ Sbjct: 185 LKDTAKAL 192Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.127 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 492,984 Number of extensions: 537 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |