Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_078914 17 2528 NP_001243764 17 2528 NP_001093890 17 4312 NP_059143 17 4312 NP_001093891 17 4312 NP_004757 16 5631 NP_001231643 16 5631 NP_005277 16 5631 NP_005329 16 7355 NP_003836 16 7355 NP_001230127 16 7355 NP_054825 16 7355 NP_001269215 16 7355 NP_001269214 16 7355 XP_005250362 16 7355 XP_005250361 16 7355 XP_006712519 16 7355 XP_006712518 16 7355 NP_694958 16 7355 NP_001128130 16 7355 NP_001028747 16 7355 NP_001053 16 7355 NP_001193985 15 9605 NP_065988 15 9605 NP_002979 15 9605 NP_001164120 15 9605 NP_001164121 15 9605 NP_112483 15 9605 NP_064547 15 9605 NP_001243496 15 9605 NP_065777 15 9605 NP_001186628 15 9605 NP_060089 15 9605 NP_061903 15 9605 XP_005262364 15 9605 XP_005262358 15 9605 XP_005267986 15 9605 XP_006719830 15 9605 XP_005248616 15 9605 XP_006714716 15 9605 NP_002539 15 9605 NP_001004479 15 9605>NP_078914 Length = 415 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 CLIYTKS 7 CL+YTK+ Sbjct: 33 CLLYTKT 39>NP_001243764 Length = 427 Score = 17.3 bits (33), Expect = 2528 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 CLIYTKS 7 CL+YTK+ Sbjct: 45 CLLYTKT 51>NP_001093890 Length = 297 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIYTKSLR 9 L++TKSLR Sbjct: 49 LLHTKSLR 56>NP_059143 Length = 296 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIYTKSLR 9 L++TKSLR Sbjct: 49 LLHTKSLR 56>NP_001093891 Length = 221 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LIYTKSLR 9 L++TKSLR Sbjct: 49 LLHTKSLR 56>NP_004757 Length = 906 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIYTKSL 8 C IYT S+ Sbjct: 533 CFIYTSSV 540>NP_001231643 Length = 463 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 C + TK+LR Sbjct: 62 CCVVTKNLR 70>NP_005277 Length = 333 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 C++YT LR Sbjct: 229 CVLYTDLLR 237>NP_005329 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CLIYTKSLR 9 C IY K LR Sbjct: 139 CSIYLKLLR 147>NP_003836 Length = 520 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 CL++ SLR Sbjct: 380 CLVWEPSLR 388>NP_001230127 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CLIYTKSLR 9 C IY K LR Sbjct: 139 CSIYLKLLR 147>NP_054825 Length = 691 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 C++ TKS R Sbjct: 190 CVLCTKSFR 198>NP_001269215 Length = 233 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 CL++ SLR Sbjct: 94 CLVWEPSLR 102>NP_001269214 Length = 234 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 CL++ SLR Sbjct: 94 CLVWEPSLR 102>XP_005250362 Length = 1003 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CLIYTKSLR 9 C IY K LR Sbjct: 105 CSIYLKLLR 113>XP_005250361 Length = 1008 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CLIYTKSLR 9 C IY K LR Sbjct: 110 CSIYLKLLR 118>XP_006712519 Length = 176 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 CL+Y K+ R Sbjct: 99 CLVYCKNGR 107>XP_006712518 Length = 176 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 CL+Y K+ R Sbjct: 99 CLVYCKNGR 107>NP_694958 Length = 364 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIYTKS 7 CLIY K+ Sbjct: 114 CLIYRKT 120>NP_001128130 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIYTKS 7 CLIY K+ Sbjct: 115 CLIYRKT 121>NP_001028747 Length = 176 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 CL+Y K+ R Sbjct: 99 CLVYCKNGR 107>NP_001053 Length = 433 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 IYTKSL 8 IYTKSL Sbjct: 219 IYTKSL 224>NP_001193985 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIYTKSLR 9 L YT+SLR Sbjct: 64 LSYTQSLR 71>NP_065988 Length = 2048 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IYTKSLR 9 IY KSLR Sbjct: 1564 IYMKSLR 1570>NP_002979 Length = 89 Score = 15.4 bits (28), Expect = 9605 Identities = 4/5 (80%), Positives = 5/5 (100%) Query: 1 CLIYT 5 CL+YT Sbjct: 31 CLVYT 35>NP_001164120 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIYTKS 7 C IYT+S Sbjct: 487 CSIYTQS 493>NP_001164121 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIYTKS 7 C IYT+S Sbjct: 445 CSIYTQS 451>NP_112483 Length = 734 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIYTKS 7 C IYT+S Sbjct: 504 CSIYTQS 510>NP_064547 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CLIYTKSL 8 C++YT+ L Sbjct: 665 CVVYTELL 672>NP_001243496 Length = 231 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LIYTKSLR 9 ++Y KSLR Sbjct: 116 VLYNKSLR 123>NP_065777 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 CL+ +SLR Sbjct: 5 CLLAVRSLR 13>NP_001186628 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 CLIYTKSL 8 C++YT+ L Sbjct: 492 CVVYTELL 499>NP_060089 Length = 517 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIYTKSL 8 C IY K+L Sbjct: 420 CRIYVKNL 427>NP_061903 Length = 1369 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LIYTKSL 8 +IYTKS+ Sbjct: 1231 IIYTKSV 1237>XP_005262364 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIYTKS 7 C IYT+S Sbjct: 202 CSIYTQS 208>XP_005262358 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIYTKS 7 C IYT+S Sbjct: 504 CSIYTQS 510>XP_005267986 Length = 2022 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 IYTKSLR 9 IY KSLR Sbjct: 1538 IYMKSLR 1544>XP_006719830 Length = 428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CLIYTK 6 CLIY K Sbjct: 402 CLIYLK 407>XP_005248616 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIYTKSLR 9 CL+ +SLR Sbjct: 5 CLLAVRSLR 13>XP_006714716 Length = 1318 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LIYTKSL 8 +IYTKS+ Sbjct: 1180 IIYTKSV 1186>NP_002539 Length = 312 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CLIYTKSL 8 C++Y K L Sbjct: 256 CMVYLKPL 263>NP_001004479 Length = 324 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 CLIYTKS 7 C+ YT+S Sbjct: 207 CIFYTQS 213Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.144 0.457 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 442,738 Number of extensions: 595 Number of successful extensions: 42 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 42 Number of HSP's successfully gapped: 42 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |