Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_689716 17 2528 NP_001244960 17 3301 NP_001139669 17 3301 NP_000273 17 4312 NP_001171475 17 4312 XP_005254116 17 4312 NP_001231293 16 5631 NP_001073948 16 5631 NP_001171164 16 5631 XP_006716244 16 5631 XP_005250774 16 5631 XP_005248625 16 5631 XP_006714732 16 5631 NP_004270 16 5631 NP_001035829 16 7355 NP_001166996 16 7355 NP_004591 16 7355 NP_001166995 16 7355 NP_775873 16 7355 NP_001035828 16 7355 NP_065876 16 7355 NP_001013663 16 7355 XP_006719585 16 7355 XP_006719584 16 7355 XP_005269101 16 7355 XP_006719583 16 7355 XP_006711560 16 7355 XP_006711559 16 7355 XP_006711558 16 7355 NP_067047 15 9605 NP_001230675 15 9605 NP_060035 15 9605 NP_055756 15 9605 NP_001118230 15 9605 NP_060587 15 9605 NP_001264214 15 9605 NP_001243183 15 9605 NP_001243181 15 9605 NP_001965 15 9605 NP_001243184 15 9605 XP_005261449 15 9605 XP_005261448 15 9605 XP_006722022 15 9605 XP_006721512 15 9605 XP_006721511 15 9605 XP_006718858 15 9605 XP_005270021 15 9605 XP_005270020 15 9605 XP_005270019 15 9605 XP_006717280 15 9605 XP_006717279 15 9605 XP_006717278 15 9605 XP_006717277 15 9605 XP_006717276 15 9605 XP_006717275 15 9605 XP_006717274 15 9605 XP_006717273 15 9605 XP_006717272 15 9605 NP_062545 15 9605>NP_689716 Length = 1052 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 CLIVSRTLL 9 C+I S+TLL Sbjct: 1017 CIIASQTLL 1025>NP_001244960 Length = 518 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 CLIVSRTLL 9 CL++SRT++ Sbjct: 76 CLLLSRTVV 84>NP_001139669 Length = 7081 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLIVSRTLL 9 C+++SRT L Sbjct: 5546 CVVLSRTFL 5554>NP_000273 Length = 728 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 CLIVSRTL 8 CL+VSR L Sbjct: 44 CLMVSRNL 51>NP_001171475 Length = 681 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 CLIVSRTL 8 CL+VSR L Sbjct: 44 CLMVSRNL 51>XP_005254116 Length = 640 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 CLIVSRTL 8 CL+VSR L Sbjct: 44 CLMVSRNL 51>NP_001231293 Length = 1392 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIVSRTLL 9 CL+ +TLL Sbjct: 353 CLVCDKTLL 361>NP_001073948 Length = 1731 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIVSRTLL 9 CL+ +TLL Sbjct: 666 CLVCDKTLL 674>NP_001171164 Length = 1705 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIVSRTLL 9 CL+ +TLL Sbjct: 666 CLVCDKTLL 674>XP_006716244 Length = 506 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLIVSRTLL 9 CL+V+ TL+ Sbjct: 312 CLMVANTLI 320>XP_005250774 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLIVSRTLL 9 CL+V+ TL+ Sbjct: 312 CLMVANTLI 320>XP_005248625 Length = 1418 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIVSRTLL 9 CL+ +TLL Sbjct: 353 CLVCDKTLL 361>XP_006714732 Length = 1633 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIVSRTLL 9 CL+ +TLL Sbjct: 568 CLVCDKTLL 576>NP_004270 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CLIVSRTLL 9 CL+V+ TL+ Sbjct: 312 CLMVANTLI 320>NP_001035829 Length = 534 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 CLIVSRT 7 C++V+RT Sbjct: 400 CMVVTRT 406>NP_001166996 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 CLIVSRT 7 C++V+RT Sbjct: 400 CMVVTRT 406>NP_004591 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 CLIVSRT 7 C++V+RT Sbjct: 400 CMVVTRT 406>NP_001166995 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 CLIVSRT 7 C++V+RT Sbjct: 400 CMVVTRT 406>NP_775873 Length = 1576 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CLIVSRTLL 9 C++ S+TL+ Sbjct: 1102 CILTSQTLM 1110>NP_001035828 Length = 525 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 CLIVSRT 7 C++V+RT Sbjct: 400 CMVVTRT 406>NP_065876 Length = 1269 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LIVSRTLL 9 L+V RTLL Sbjct: 887 LVVQRTLL 894>NP_001013663 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CLIVSRTLL 9 CL+ RTLL Sbjct: 301 CLVGVRTLL 309>XP_006719585 Length = 1459 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CLIVSRTLL 9 C++ S+TL+ Sbjct: 985 CILTSQTLM 993>XP_006719584 Length = 1515 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CLIVSRTLL 9 C++ S+TL+ Sbjct: 1041 CILTSQTLM 1049>XP_005269101 Length = 1577 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CLIVSRTLL 9 C++ S+TL+ Sbjct: 1103 CILTSQTLM 1111>XP_006719583 Length = 1586 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CLIVSRTLL 9 C++ S+TL+ Sbjct: 1112 CILTSQTLM 1120>XP_006711560 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 CLIVSRT 7 C++V+RT Sbjct: 400 CMVVTRT 406>XP_006711559 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 CLIVSRT 7 C++V+RT Sbjct: 422 CMVVTRT 428>XP_006711558 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 CLIVSRT 7 C++V+RT Sbjct: 422 CMVVTRT 428>NP_067047 Length = 2506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIVSRTL 8 CL SRT+ Sbjct: 1729 CLAASRTI 1736>NP_001230675 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIVSRTLL 9 C+I +TLL Sbjct: 315 CMIKKKTLL 323>NP_060035 Length = 541 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIVSRTLL 9 C+I +TLL Sbjct: 453 CMIKKKTLL 461>NP_055756 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIVSRT 7 CL +SRT Sbjct: 65 CLFLSRT 71>NP_001118230 Length = 549 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CLIVSRTLL 9 C+ V TLL Sbjct: 428 CIFVGETLL 436>NP_060587 Length = 1224 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLIVSR 6 CL+VSR Sbjct: 913 CLLVSR 918>NP_001264214 Length = 1437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIVSRT 7 CLI +RT Sbjct: 620 CLIANRT 626>NP_001243183 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 CLIVSRTL 8 CL++++TL Sbjct: 503 CLLLAKTL 510>NP_001243181 Length = 867 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 CLIVSRTL 8 CL++++TL Sbjct: 592 CLLLAKTL 599>NP_001965 Length = 886 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 CLIVSRTL 8 CL++++TL Sbjct: 644 CLLLAKTL 651>NP_001243184 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 CLIVSRTL 8 CL++++TL Sbjct: 467 CLLLAKTL 474>XP_005261449 Length = 1029 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIVSRT 7 CL +SRT Sbjct: 127 CLFLSRT 133>XP_005261448 Length = 1032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIVSRT 7 CL +SRT Sbjct: 127 CLFLSRT 133>XP_006722022 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CLIVSRTLL 9 C+I +TLL Sbjct: 315 CMIKKKTLL 323>XP_006721512 Length = 379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CLIVSRTLL 9 C+ V TLL Sbjct: 258 CIFVGETLL 266>XP_006721511 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CLIVSRTLL 9 C+ V TLL Sbjct: 277 CIFVGETLL 285>XP_006718858 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CLIVSRT 7 CLI +RT Sbjct: 96 CLIANRT 102>XP_005270021 Length = 753 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLIVSR 6 CL+VSR Sbjct: 442 CLLVSR 447>XP_005270020 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLIVSR 6 CL+VSR Sbjct: 654 CLLVSR 659>XP_005270019 Length = 965 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CLIVSR 6 CL+VSR Sbjct: 654 CLLVSR 659>XP_006717280 Length = 2221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIVSRTL 8 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717279 Length = 2506 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIVSRTL 8 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717278 Length = 2566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIVSRTL 8 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717277 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIVSRTL 8 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717276 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIVSRTL 8 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717275 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIVSRTL 8 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717274 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIVSRTL 8 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717273 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIVSRTL 8 CL SRT+ Sbjct: 1729 CLAASRTI 1736>XP_006717272 Length = 2567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CLIVSRTL 8 CL SRT+ Sbjct: 1729 CLAASRTI 1736>NP_062545 Length = 299 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 CLIVSRTLL 9 CL VSR L Sbjct: 50 CLAVSRIFL 58Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.345 0.150 0.450 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 331,881 Number of extensions: 495 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |