Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 20 299 NP_005893 18 1935 NP_005891 18 1935 NP_001003688 18 1935 NP_001003652 18 1935 NP_001138576 18 1935 NP_001129409 18 1935 NP_001138574 18 1935 NP_005892 18 1935 NP_001138575 18 1935 NP_001001419 18 1935 NP_005894 18 1935 NP_001001420 18 1935 NP_005896 18 1935 NP_001120689 18 1935 XP_006722514 18 1935 XP_005258316 18 1935 XP_006720569 18 1935 XP_005266461 18 1935 XP_005266460 18 1935 XP_005266458 18 1935 XP_006719890 18 1935 XP_005263050 18 1935 XP_005263049 18 1935 XP_005263048 18 1935 XP_006714280 18 1935 NP_665682 16 5631 NP_001188410 16 5631 NP_115912 16 5631 NP_001188411 16 5631 NP_001188409 16 5631 NP_000951 16 5631 XP_005259152 16 5631 XP_005259150 16 5631 XP_006712295 16 5631 XP_006712294 16 5631 NP_001119580 16 7355 NP_000330 16 7355 NP_001119579 16 7355 XP_005256176 16 7355 NP_001007190 16 7355 NP_055223 15 9605 NP_005662 15 9605 NP_001269128 15 9605 NP_001269118 15 9605 NP_001257826 15 9605 NP_001257825 15 9605 NP_001257823 15 9605 NP_001257824 15 9605 XP_006719412 15 9605 NP_068567 15 9605>NP_005350 Length = 552 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CILRMRFVK 9 CILRM FVK Sbjct: 499 CILRMSFVK 507>NP_005893 Length = 425 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 370 CTIRMSFVK 378>NP_005891 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 410 CTIRMSFVK 418>NP_001003688 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 410 CTIRMSFVK 418>NP_001003652 Length = 467 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 412 CTIRMSFVK 420>NP_001138576 Length = 230 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 175 CTIRMSFVK 183>NP_001129409 Length = 437 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 382 CTIRMSFVK 390>NP_001138574 Length = 320 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 265 CTIRMSFVK 273>NP_005892 Length = 467 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 412 CTIRMSFVK 420>NP_001138575 Length = 381 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 326 CTIRMSFVK 334>NP_001001419 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 410 CTIRMSFVK 418>NP_005894 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 410 CTIRMSFVK 418>NP_001001420 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 410 CTIRMSFVK 418>NP_005896 Length = 430 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 375 CTIRMSFVK 383>NP_001120689 Length = 467 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 412 CTIRMSFVK 420>XP_006722514 Length = 467 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 412 CTIRMSFVK 420>XP_005258316 Length = 467 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 412 CTIRMSFVK 420>XP_006720569 Length = 373 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 318 CTIRMSFVK 326>XP_005266461 Length = 356 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 289 CTIRMSFVK 297>XP_005266460 Length = 393 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 326 CTIRMSFVK 334>XP_005266458 Length = 442 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 375 CTIRMSFVK 383>XP_006719890 Length = 479 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 412 CTIRMSFVK 420>XP_005263050 Length = 426 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 371 CTIRMSFVK 379>XP_005263049 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 410 CTIRMSFVK 418>XP_005263048 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 410 CTIRMSFVK 418>XP_006714280 Length = 465 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C +RM FVK Sbjct: 410 CTIRMSFVK 418>NP_665682 Length = 938 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 CI ++ FVK Sbjct: 763 CICKLTFVK 771>NP_001188410 Length = 903 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 CI ++ FVK Sbjct: 728 CICKLTFVK 736>NP_115912 Length = 934 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 CI ++ FVK Sbjct: 759 CICKLTFVK 767>NP_001188411 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 CI ++ FVK Sbjct: 723 CICKLTFVK 731>NP_001188409 Length = 959 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 CI ++ FVK Sbjct: 784 CICKLTFVK 792>NP_000951 Length = 386 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C LRMR+ + Sbjct: 170 CFLRMRWAQ 178>XP_005259152 Length = 257 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C LRMR+ + Sbjct: 170 CFLRMRWAQ 178>XP_005259150 Length = 342 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 C LRMR+ + Sbjct: 170 CFLRMRWAQ 178>XP_006712295 Length = 923 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 CI ++ FVK Sbjct: 748 CICKLTFVK 756>XP_006712294 Length = 928 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 CI ++ FVK Sbjct: 753 CICKLTFVK 761>NP_001119580 Length = 1021 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CILRMR 6 C++RMR Sbjct: 772 CVMRMR 777>NP_000330 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CILRMR 6 C++RMR Sbjct: 772 CVMRMR 777>NP_001119579 Length = 1029 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CILRMR 6 C++RMR Sbjct: 771 CVMRMR 776>XP_005256176 Length = 1020 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CILRMR 6 C++RMR Sbjct: 771 CVMRMR 776>NP_001007190 Length = 53 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CILRMRFVK 9 CI R+ FV+ Sbjct: 42 CISRLEFVQ 50>NP_055223 Length = 180 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LRMRFVK 9 +RMRF++ Sbjct: 163 IRMRFIR 169>NP_005662 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ILRMRFVK 9 +LR RF+K Sbjct: 203 VLRRRFLK 210>NP_001269128 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ILRMRFVK 9 +LR RF+K Sbjct: 162 VLRRRFLK 169>NP_001269118 Length = 233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ILRMRFVK 9 +LR RF+K Sbjct: 166 VLRRRFLK 173>NP_001257826 Length = 114 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LRMRFVK 9 +RMRF++ Sbjct: 97 IRMRFIR 103>NP_001257825 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LRMRFVK 9 +RMRF++ Sbjct: 117 IRMRFIR 123>NP_001257823 Length = 188 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LRMRFVK 9 +RMRF++ Sbjct: 171 IRMRFIR 177>NP_001257824 Length = 134 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 LRMRFVK 9 +RMRF++ Sbjct: 117 IRMRFIR 123>XP_006719412 Length = 724 Score = 15.4 bits (28), Expect = 9605 Identities = 3/8 (37%), Positives = 7/8 (87%) Query: 1 CILRMRFV 8 C++R +F+ Sbjct: 704 CVVRTKFI 711>NP_068567 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CILRMRFV 8 C L +RFV Sbjct: 389 CFLLLRFV 396Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.363 0.160 0.548 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 400,430 Number of extensions: 611 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 14 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (17.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |