Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000312 20 390 NP_001171601 17 2528 NP_001954 17 2528 NP_001171602 17 2528 XP_005262857 17 2528 XP_005262856 17 2528 XP_006714188 17 2528 XP_006714187 17 2528 XP_005262855 17 2528 XP_005262854 17 2528 XP_005262853 17 2528 NP_001186802 17 4312 NP_001186803 17 4312 NP_003770 17 4312 NP_149015 17 4312 XP_006715989 17 4312 XP_006711664 17 4312 XP_005245623 17 4312 XP_006711663 17 4312 NP_001035304 16 5631 NP_699186 16 5631 XP_005266891 16 5631 XP_005266890 16 5631 NP_004056 16 5631 NP_001361 16 7355 NP_114141 16 7355 XP_006712019 16 7355 NP_001139669 16 7355 NP_055786 15 9605 NP_001002860 15 9605 NP_001120650 15 9605 NP_001275980 15 9605 NP_060637 15 9605 NP_060203 15 9605 NP_001275981 15 9605 XP_006725229 15 9605 XP_006720258 15 9605 XP_006713955 15 9605 XP_005272341 15 9605 XP_005272340 15 9605>NP_000312 Length = 928 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CIFIEAVDL 9 CIFI AVDL Sbjct: 102 CIFIAAVDL 110>NP_001171601 Length = 1166 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CIFIEAVD 8 C++IEA+D Sbjct: 949 CMYIEALD 956>NP_001954 Length = 1207 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CIFIEAVD 8 C++IEA+D Sbjct: 990 CMYIEALD 997>NP_001171602 Length = 1165 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CIFIEAVD 8 C++IEA+D Sbjct: 948 CMYIEALD 955>XP_005262857 Length = 1052 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CIFIEAVD 8 C++IEA+D Sbjct: 909 CMYIEALD 916>XP_005262856 Length = 1061 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CIFIEAVD 8 C++IEA+D Sbjct: 990 CMYIEALD 997>XP_006714188 Length = 1132 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CIFIEAVD 8 C++IEA+D Sbjct: 907 CMYIEALD 914>XP_006714187 Length = 1133 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CIFIEAVD 8 C++IEA+D Sbjct: 990 CMYIEALD 997>XP_005262855 Length = 1134 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CIFIEAVD 8 C++IEA+D Sbjct: 909 CMYIEALD 916>XP_005262854 Length = 1173 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CIFIEAVD 8 C++IEA+D Sbjct: 948 CMYIEALD 955>XP_005262853 Length = 1215 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CIFIEAVD 8 C++IEA+D Sbjct: 990 CMYIEALD 997>NP_001186802 Length = 393 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C+F+ VDL Sbjct: 190 CLFLHDVDL 198>NP_001186803 Length = 393 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C+F+ VDL Sbjct: 190 CLFLHDVDL 198>NP_003770 Length = 393 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C+F+ VDL Sbjct: 190 CLFLHDVDL 198>NP_149015 Length = 5142 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CIFIEAVDL 9 CI+++ VDL Sbjct: 5116 CIWLDKVDL 5124>XP_006715989 Length = 5148 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CIFIEAVDL 9 CI+++ VDL Sbjct: 5122 CIWLDKVDL 5130>XP_006711664 Length = 310 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C+F+ VDL Sbjct: 190 CLFLHDVDL 198>XP_005245623 Length = 393 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C+F+ VDL Sbjct: 190 CLFLHDVDL 198>XP_006711663 Length = 393 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C+F+ VDL Sbjct: 190 CLFLHDVDL 198>NP_001035304 Length = 208 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C ++EA DL Sbjct: 81 CFYLEAGDL 89>NP_699186 Length = 141 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C ++EA DL Sbjct: 81 CFYLEAGDL 89>XP_005266891 Length = 190 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C ++EA DL Sbjct: 81 CFYLEAGDL 89>XP_005266890 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C ++EA DL Sbjct: 80 CFYLEAGDL 88>NP_004056 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FIEAVDL 9 F+EA+DL Sbjct: 111 FLEAIDL 117>NP_001361 Length = 4158 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CIFIEAVDL 9 C+++ A+DL Sbjct: 2882 CMWVRAMDL 2890>NP_114141 Length = 5635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CIFIEAVD 8 C+ I AVD Sbjct: 541 CLIISAVD 548>XP_006712019 Length = 4158 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CIFIEAVDL 9 C+++ A+DL Sbjct: 2882 CMWVRAMDL 2890>NP_001139669 Length = 7081 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 CIFIEA 6 C+F+EA Sbjct: 6795 CVFLEA 6800>NP_055786 Length = 817 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CIFIEAVD 8 CI +EA+D Sbjct: 74 CIAMEALD 81>NP_001002860 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C++ + VDL Sbjct: 331 CMYTDVVDL 339>NP_001120650 Length = 983 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CIFIEAVD 8 C+F A+D Sbjct: 969 CVFFTAMD 976>NP_001275980 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CIFIEAVD 8 C+F A+D Sbjct: 880 CVFFTAMD 887>NP_060637 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C++ + VDL Sbjct: 331 CMYTDVVDL 339>NP_060203 Length = 975 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CIFIEAVD 8 C+F A+D Sbjct: 961 CVFFTAMD 968>NP_001275981 Length = 850 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CIFIEAVD 8 C+F A+D Sbjct: 836 CVFFTAMD 843>XP_006725229 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C++ + VDL Sbjct: 331 CMYTDVVDL 339>XP_006720258 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CIFIEAVDL 9 C++ + VDL Sbjct: 331 CMYTDVVDL 339>XP_006713955 Length = 861 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CIFIEAVD 8 C+F A+D Sbjct: 847 CVFFTAMD 854>XP_005272341 Length = 894 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CIFIEAVD 8 C+F A+D Sbjct: 880 CVFFTAMD 887>XP_005272340 Length = 913 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CIFIEAVD 8 C+F A+D Sbjct: 899 CVFFTAMD 906Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.344 0.158 0.506 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 403,703 Number of extensions: 665 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |