Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001093112 17 3301 NP_060818 17 3301 XP_005256104 17 3301 XP_005256103 17 3301 NP_072179 17 4312 NP_002881 17 4312 NP_114432 17 4312 NP_001269609 17 4312 NP_001269608 17 4312 NP_689804 17 4312 NP_001273173 17 4312 NP_001273172 17 4312 XP_006719326 17 4312 XP_006719325 17 4312 XP_005251961 17 4312 XP_006717106 17 4312 XP_006717105 17 4312 XP_005251958 17 4312 NP_000292 16 5631 NP_002514 16 5631 NP_003250 16 5631 NP_003900 16 7355 NP_001186363 16 7355 NP_775862 16 7355 XP_005258234 16 7355 XP_005268859 16 7355 XP_005251150 16 7355 NP_057185 16 7355 NP_001167639 15 9605 NP_001167638 15 9605 NP_001128524 15 9605 NP_003168 15 9605 NP_002342 15 9605 NP_001108409 15 9605 NP_001269796 15 9605 NP_001269800 15 9605 NP_001269801 15 9605 NP_001269799 15 9605 NP_001121163 15 9605 NP_057208 15 9605 NP_001269797 15 9605 NP_001269798 15 9605 XP_005252204 15 9605 NP_899234 15 9605 NP_066939 15 9605>NP_001093112 Length = 770 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CHGKVSKTL 9 C+G++ KTL Sbjct: 511 CNGEILKTL 519>NP_060818 Length = 770 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CHGKVSKTL 9 C+G++ KTL Sbjct: 511 CNGEILKTL 519>XP_005256104 Length = 770 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CHGKVSKTL 9 C+G++ KTL Sbjct: 511 CNGEILKTL 519>XP_005256103 Length = 770 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CHGKVSKTL 9 C+G++ KTL Sbjct: 511 CNGEILKTL 519>NP_072179 Length = 870 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HGKVSK 7 HGK+SK Sbjct: 176 HGKISK 181>NP_002881 Length = 1047 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HGKVSK 7 HGK+SK Sbjct: 353 HGKISK 358>NP_114432 Length = 1249 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 CHGKVSKTL 9 C GKVS+ L Sbjct: 761 CRGKVSEGL 769>NP_001269609 Length = 1460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HGKVSKTL 9 HGK KTL Sbjct: 556 HGKPDKTL 563>NP_001269608 Length = 1478 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HGKVSKTL 9 HGK KTL Sbjct: 556 HGKPDKTL 563>NP_689804 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 HGKVSKTL 9 +G+VSKTL Sbjct: 400 YGEVSKTL 407>NP_001273173 Length = 484 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 HGKVSKTL 9 +G+VSKTL Sbjct: 321 YGEVSKTL 328>NP_001273172 Length = 523 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 HGKVSKTL 9 +G+VSKTL Sbjct: 360 YGEVSKTL 367>XP_006719326 Length = 539 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 HGKVSKTL 9 +G+VSKTL Sbjct: 400 YGEVSKTL 407>XP_006719325 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 HGKVSKTL 9 +G+VSKTL Sbjct: 400 YGEVSKTL 407>XP_005251961 Length = 1433 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HGKVSKTL 9 HGK KTL Sbjct: 556 HGKPDKTL 563>XP_006717106 Length = 1460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HGKVSKTL 9 HGK KTL Sbjct: 556 HGKPDKTL 563>XP_006717105 Length = 1460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HGKVSKTL 9 HGK KTL Sbjct: 556 HGKPDKTL 563>XP_005251958 Length = 1460 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HGKVSKTL 9 HGK KTL Sbjct: 556 HGKPDKTL 563>NP_000292 Length = 810 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GKVSKTL 9 GK+SKT+ Sbjct: 195 GKISKTM 201>NP_002514 Length = 431 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HGKVSKTL 9 +GK+ KTL Sbjct: 237 YGKIKKTL 244>NP_003250 Length = 924 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 HGKVSKTL 9 HG V+KT+ Sbjct: 651 HGSVAKTV 658>NP_003900 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CHGKVSKTL 9 C+G + KT+ Sbjct: 202 CYGDMDKTI 210>NP_001186363 Length = 133 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CHGKVSKT 8 C GK +KT Sbjct: 69 CFGKFTKT 76>NP_775862 Length = 2344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CHGKVS 6 CH KVS Sbjct: 1743 CHDKVS 1748>XP_005258234 Length = 933 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CHGKVSKT 8 C G +SKT Sbjct: 14 CKGSLSKT 21>XP_005268859 Length = 2361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CHGKVS 6 CH KVS Sbjct: 1760 CHDKVS 1765>XP_005251150 Length = 537 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CHGKVSKTL 9 C+G + KT+ Sbjct: 202 CYGDMDKTI 210>NP_057185 Length = 180 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CHGKVSKT 8 C GK +KT Sbjct: 69 CFGKFTKT 76>NP_001167639 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HGKVSK 7 HGK+S+ Sbjct: 170 HGKISR 175>NP_001167638 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HGKVSK 7 HGK+S+ Sbjct: 170 HGKISR 175>NP_001128524 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HGKVSK 7 HGK+S+ Sbjct: 170 HGKISR 175>NP_003168 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HGKVSK 7 HGK+S+ Sbjct: 170 HGKISR 175>NP_002342 Length = 128 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HGKVSK 7 HGK+S+ Sbjct: 8 HGKISR 13>NP_001108409 Length = 125 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HGKVSK 7 HGK+S+ Sbjct: 8 HGKISR 13>NP_001269796 Length = 251 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GKVSKT 8 GK+SKT Sbjct: 97 GKISKT 102>NP_001269800 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GKVSKT 8 GK+SKT Sbjct: 263 GKISKT 268>NP_001269801 Length = 431 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GKVSKT 8 GK+SKT Sbjct: 263 GKISKT 268>NP_001269799 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GKVSKT 8 GK+SKT Sbjct: 263 GKISKT 268>NP_001121163 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GKVSKT 8 GK+SKT Sbjct: 263 GKISKT 268>NP_057208 Length = 417 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GKVSKT 8 GK+SKT Sbjct: 263 GKISKT 268>NP_001269797 Length = 378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GKVSKT 8 GK+SKT Sbjct: 263 GKISKT 268>NP_001269798 Length = 396 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GKVSKT 8 GK+SKT Sbjct: 263 GKISKT 268>XP_005252204 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 2 HGKVSK 7 HGK+S+ Sbjct: 170 HGKISR 175>NP_899234 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 GKVSKT 8 GK+SKT Sbjct: 179 GKISKT 184>NP_066939 Length = 1119 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CHGKVS 6 C GKVS Sbjct: 1037 CRGKVS 1042Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.131 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 546,222 Number of extensions: 756 Number of successful extensions: 45 Number of sequences better than 10000.0: 45 Number of HSP's gapped: 45 Number of HSP's successfully gapped: 45 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |