Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006209 18 1135 XP_006713721 18 1135 XP_006718234 18 1482 NP_055979 17 4312 XP_005245848 17 4312 XP_005245847 17 4312 NP_079388 16 5631 NP_001035743 16 5631 XP_005247814 16 5631 XP_006713804 16 5631 NP_031392 16 7355 NP_001007268 16 7355 NP_001182570 16 7355 NP_937828 16 7355 NP_002883 16 7355 NP_075377 16 7355 NP_075376 16 7355 NP_064715 16 7355 NP_059115 16 7355 XP_005268022 16 7355 XP_005268021 16 7355 XP_005246450 16 7355 XP_005246449 16 7355 NP_000501 15 9605 NP_001018090 15 9605 NP_775777 15 9605 NP_006601 15 9605 NP_079021 15 9605 NP_003465 15 9605 NP_001275902 15 9605 NP_001275903 15 9605 NP_067673 15 9605 NP_001275904 15 9605 NP_001177695 15 9605 XP_005278445 15 9605 XP_005278444 15 9605 XP_005278442 15 9605 XP_006723098 15 9605 XP_005258600 15 9605 XP_005278440 15 9605>NP_006209 Length = 1068 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 EATLITIK 9 EATLITIK Sbjct: 39 EATLITIK 46>XP_006713721 Length = 1068 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 EATLITIK 9 EATLITIK Sbjct: 39 EATLITIK 46>XP_006718234 Length = 708 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 CEATLITIK 9 CE +L+TIK Sbjct: 690 CETSLLTIK 698>NP_055979 Length = 1019 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CEATLITIK 9 CEA+ +T++ Sbjct: 735 CEASAVTVR 743>XP_005245848 Length = 816 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CEATLITIK 9 CEA+ +T++ Sbjct: 532 CEASAVTVR 540>XP_005245847 Length = 999 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CEATLITIK 9 CEA+ +T++ Sbjct: 715 CEASAVTVR 723>NP_079388 Length = 858 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CEATLITI 8 CE T IT+ Sbjct: 304 CEKTFITV 311>NP_001035743 Length = 710 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CEATLITI 8 CE T IT+ Sbjct: 304 CEKTFITV 311>XP_005247814 Length = 738 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CEATLITI 8 CE T IT+ Sbjct: 304 CEKTFITV 311>XP_006713804 Length = 769 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 CEATLITI 8 CE T IT+ Sbjct: 304 CEKTFITV 311>NP_031392 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 CEATLITIK 9 C++TL++++ Sbjct: 106 CDSTLVSLR 114>NP_001007268 Length = 1324 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 CEATLITIK 9 C++TL++++ Sbjct: 106 CDSTLVSLR 114>NP_001182570 Length = 1461 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 CEATLITIK 9 C++TL++++ Sbjct: 106 CDSTLVSLR 114>NP_937828 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 C A L+T+K Sbjct: 207 CVAALLTLK 215>NP_002883 Length = 1257 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CEA + T+K Sbjct: 25 CEAKIKTVK 33>NP_075377 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CEA + T+K Sbjct: 25 CEAKIKTVK 33>NP_075376 Length = 1203 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CEA + T+K Sbjct: 25 CEAKIKTVK 33>NP_064715 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CEATLI 6 CEATL+ Sbjct: 277 CEATLL 282>NP_059115 Length = 505 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 CEATLITI 8 C A+LITI Sbjct: 453 CGASLITI 460>XP_005268022 Length = 1208 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CEA + T+K Sbjct: 25 CEAKIKTVK 33>XP_005268021 Length = 1277 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CEA + T+K Sbjct: 25 CEAKIKTVK 33>XP_005246450 Length = 1461 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 CEATLITIK 9 C++TL++++ Sbjct: 106 CDSTLVSLR 114>XP_005246449 Length = 1463 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 CEATLITIK 9 C++TL++++ Sbjct: 106 CDSTLVSLR 114>NP_000501 Length = 129 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CEATLITI 8 CE T ITI Sbjct: 21 CELTNITI 28>NP_001018090 Length = 129 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 CEATLITI 8 CE T ITI Sbjct: 21 CELTNITI 28>NP_775777 Length = 246 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CE TL+ I+ Sbjct: 61 CEETLVFIE 69>NP_006601 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CEATLITIK 9 CE T T+K Sbjct: 396 CEETFYTMK 404>NP_079021 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CE T +T++ Sbjct: 464 CETTGVTVR 472>NP_003465 Length = 909 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CEATLITIK 9 C AT T+K Sbjct: 451 CNATTCTLK 459>NP_001275902 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CEATLITIK 9 C AT T+K Sbjct: 448 CNATTCTLK 456>NP_001275903 Length = 737 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CEATLITIK 9 C AT T+K Sbjct: 448 CNATTCTLK 456>NP_067673 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CEATLITIK 9 C AT T+K Sbjct: 451 CNATTCTLK 459>NP_001275904 Length = 735 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CEATLITIK 9 C AT T+K Sbjct: 448 CNATTCTLK 456>NP_001177695 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CEATLI 6 C+ATLI Sbjct: 245 CDATLI 250>XP_005278445 Length = 197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CE TL+ I+ Sbjct: 12 CEETLVFIE 20>XP_005278444 Length = 210 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CE TL+ I+ Sbjct: 74 CEETLVFIE 82>XP_005278442 Length = 254 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CE TL+ I+ Sbjct: 74 CEETLVFIE 82>XP_006723098 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CE TL+ I+ Sbjct: 70 CEETLVFIE 78>XP_005258600 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CE TL+ I+ Sbjct: 74 CEETLVFIE 82>XP_005278440 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CEATLITIK 9 CE TL+ I+ Sbjct: 74 CEETLVFIE 82Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.326 0.134 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 401,362 Number of extensions: 587 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |