Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_570711 22 103 NP_570712 22 103 NP_570714 22 103 NP_570713 22 103 NP_570716 22 103 NP_000235 22 103 NP_570715 22 103 XP_006718620 22 103 XP_005274059 22 103 XP_005274060 22 103 XP_005274058 22 103 NP_056150 17 2528 XP_006719370 17 2528 XP_006719369 17 2528 XP_006719368 17 2528 NP_004975 17 3301 NP_001274448 16 5631 NP_001274449 16 5631 NP_068659 16 5631 NP_068658 16 5631 NP_004349 16 5631 NP_001274447 16 5631 NP_001274453 16 5631 NP_001274445 16 5631 NP_001274451 16 5631 NP_001274446 16 5631 NP_001004339 16 5631 XP_006710709 16 5631 NP_004475 16 7355 NP_001158090 16 7355 NP_005484 16 7355 NP_001158089 16 7355 NP_001171572 16 7355 NP_694999 16 7355 NP_003412 16 7355 NP_001007095 16 7355 NP_060382 16 7355 NP_775862 16 7355 NP_001158608 16 7355 XP_005268859 16 7355 XP_006719376 16 7355 XP_005268810 16 7355 XP_005268809 16 7355 XP_005252643 16 7355 XP_005252642 16 7355 XP_005252640 16 7355 XP_005252639 16 7355 XP_006717564 16 7355 XP_005252638 16 7355 XP_006715008 16 7355 XP_005263140 16 7355 NP_036416 16 7355 NP_004989 15 9605 NP_055105 15 9605 NP_004457 15 9605 NP_037477 15 9605 NP_036467 15 9605 NP_001265623 15 9605 NP_061136 15 9605 NP_001265624 15 9605 XP_006724827 15 9605 XP_005272534 15 9605 XP_005272533 15 9605 XP_005272532 15 9605 XP_006717089 15 9605 XP_006717088 15 9605>NP_570711 Length = 610 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 230 CDRKMEVAF 238>NP_570712 Length = 615 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 235 CDRKMEVAF 243>NP_570714 Length = 615 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 235 CDRKMEVAF 243>NP_570713 Length = 615 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 235 CDRKMEVAF 243>NP_570716 Length = 615 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 235 CDRKMEVAF 243>NP_000235 Length = 615 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 235 CDRKMEVAF 243>NP_570715 Length = 615 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 235 CDRKMEVAF 243>XP_006718620 Length = 610 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 230 CDRKMEVAF 238>XP_005274059 Length = 610 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 230 CDRKMEVAF 238>XP_005274060 Length = 610 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 230 CDRKMEVAF 238>XP_005274058 Length = 610 Score = 21.9 bits (45), Expect = 103 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 CDRKMEV F Sbjct: 230 CDRKMEVAF 238>NP_056150 Length = 2210 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CDRKMEV 7 CD KMEV Sbjct: 656 CDAKMEV 662>XP_006719370 Length = 2076 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CDRKMEV 7 CD KMEV Sbjct: 522 CDAKMEV 528>XP_006719369 Length = 2200 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CDRKMEV 7 CD KMEV Sbjct: 646 CDAKMEV 652>XP_006719368 Length = 2209 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CDRKMEV 7 CD KMEV Sbjct: 656 CDAKMEV 662>NP_004975 Length = 1032 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 CDRKMEV 7 C RKMEV Sbjct: 615 CHRKMEV 621>NP_001274448 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DRKMEV 7 DRKMEV Sbjct: 128 DRKMEV 133>NP_001274449 Length = 468 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DRKMEV 7 DRKMEV Sbjct: 128 DRKMEV 133>NP_068659 Length = 580 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DRKMEV 7 DRKMEV Sbjct: 240 DRKMEV 245>NP_068658 Length = 539 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DRKMEV 7 DRKMEV Sbjct: 199 DRKMEV 204>NP_004349 Length = 566 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DRKMEV 7 DRKMEV Sbjct: 226 DRKMEV 231>NP_001274447 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DRKMEV 7 DRKMEV Sbjct: 176 DRKMEV 181>NP_001274453 Length = 388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DRKMEV 7 DRKMEV Sbjct: 48 DRKMEV 53>NP_001274445 Length = 516 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DRKMEV 7 DRKMEV Sbjct: 176 DRKMEV 181>NP_001274451 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DRKMEV 7 DRKMEV Sbjct: 87 DRKMEV 92>NP_001274446 Length = 502 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 DRKMEV 7 DRKMEV Sbjct: 162 DRKMEV 167>NP_001004339 Length = 759 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 C R+MEV + Sbjct: 610 CSREMEVSY 618>XP_006710709 Length = 417 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 C R+MEV + Sbjct: 268 CSREMEVSY 276>NP_004475 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CDRKME 6 C RKME Sbjct: 73 CSRKME 78>NP_001158090 Length = 564 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CDRKME 6 C RKME Sbjct: 73 CSRKME 78>NP_005484 Length = 729 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CDRKMEV 7 CD +MEV Sbjct: 594 CDTEMEV 600>NP_001158089 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CDRKME 6 C RKME Sbjct: 73 CSRKME 78>NP_001171572 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CDRKMEVV 8 CD K E++ Sbjct: 104 CDEKHEII 111>NP_694999 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 3/9 (33%), Positives = 8/9 (88%) Query: 1 CDRKMEVVF 9 C+R+ +++F Sbjct: 632 CERQHQIIF 640>NP_003412 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CDRKMEVV 8 CD K E++ Sbjct: 104 CDEKHEII 111>NP_001007095 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CDRKMEVV 8 CD K E++ Sbjct: 104 CDEKHEII 111>NP_060382 Length = 1022 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKMEVVF 9 +KME+VF Sbjct: 962 QKMEIVF 968>NP_775862 Length = 2344 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CDRKMEVV 8 C+R+ EVV Sbjct: 1904 CEREAEVV 1911>NP_001158608 Length = 986 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKMEVVF 9 +KME+VF Sbjct: 926 QKMEIVF 932>XP_005268859 Length = 2361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CDRKMEVV 8 C+R+ EVV Sbjct: 1921 CEREAEVV 1928>XP_006719376 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 CD +EV+F Sbjct: 264 CDLAVEVLF 272>XP_005268810 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 CD +EV+F Sbjct: 186 CDLAVEVLF 194>XP_005268809 Length = 1023 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 CD +EV+F Sbjct: 204 CDLAVEVLF 212>XP_005252643 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CDRKMEVV 8 CD K E++ Sbjct: 14 CDEKHEII 21>XP_005252642 Length = 471 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CDRKMEVV 8 CD K E++ Sbjct: 14 CDEKHEII 21>XP_005252640 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CDRKMEVV 8 CD K E++ Sbjct: 104 CDEKHEII 111>XP_005252639 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CDRKMEVV 8 CD K E++ Sbjct: 104 CDEKHEII 111>XP_006717564 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CDRKMEVV 8 CD K E++ Sbjct: 104 CDEKHEII 111>XP_005252638 Length = 561 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 1 CDRKMEVV 8 CD K E++ Sbjct: 104 CDEKHEII 111>XP_006715008 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 CDRKMEV 7 CD +MEV Sbjct: 365 CDTEMEV 371>XP_005263140 Length = 1034 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKMEVVF 9 +KME+VF Sbjct: 974 QKMEIVF 980>NP_036416 Length = 1083 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 CD +EV+F Sbjct: 264 CDLAVEVLF 272>NP_004989 Length = 1108 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 C+R +V+F Sbjct: 519 CERNRDVLF 527>NP_055105 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 CDRKMEV 7 CD+ +EV Sbjct: 639 CDKSLEV 645>NP_004457 Length = 572 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 1 CDRKME 6 C RKME Sbjct: 69 CTRKME 74>NP_037477 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 CDR + VV+ Sbjct: 138 CDRFVAVVY 146>NP_036467 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 C+R +V+F Sbjct: 517 CERNRDVLF 525>NP_001265623 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 CDR + VV+ Sbjct: 138 CDRFVAVVY 146>NP_061136 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CDRKMEVV 8 C++KME V Sbjct: 207 CEQKMENV 214>NP_001265624 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 CDR + VV+ Sbjct: 129 CDRFVAVVY 137>XP_006724827 Length = 904 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 CDRKMEVV 8 C++KME V Sbjct: 207 CEQKMENV 214>XP_005272534 Length = 1071 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 C+R +V+F Sbjct: 490 CERNRDVLF 498>XP_005272533 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 C+R +V+F Sbjct: 515 CERNRDVLF 523>XP_005272532 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 CDRKMEVVF 9 C+R +V+F Sbjct: 519 CERNRDVLF 527>XP_006717089 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 CDRKMEV 7 CD+ +EV Sbjct: 194 CDKSLEV 200>XP_006717088 Length = 1024 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 CDRKMEV 7 CD+ +EV Sbjct: 565 CDKSLEV 571Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.340 0.146 0.482 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 474,537 Number of extensions: 804 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |