Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_444256 20 390 NP_444254 20 390 NP_444253 20 390 NP_444255 20 390 XP_005247551 20 390 XP_005247550 20 390 XP_006713712 20 390 XP_005247549 20 390 NP_001001669 17 3301 NP_997254 17 3301 XP_005252508 17 3301 XP_006717511 17 3301 XP_005252507 17 3301 XP_006714848 17 3301 XP_005268504 17 3301 XP_006714847 17 3301 XP_006718479 17 4312 XP_006718474 17 4312 NP_149037 16 5631 NP_001171700 16 5631 NP_060422 16 5631 NP_054733 16 7355 NP_079255 16 7355 NP_006076 16 7355 NP_001273079 16 7355 NP_114120 16 7355 NP_001106203 16 7355 XP_005268181 16 7355 XP_006720336 16 7355 XP_006720335 16 7355 XP_005268373 16 7355 XP_005268372 16 7355 XP_005268371 16 7355 XP_005268369 16 7355 XP_006720029 16 7355 XP_005268367 16 7355 XP_005268366 16 7355 XP_005268365 16 7355 XP_005268364 16 7355 XP_005273062 16 7355 XP_005273061 16 7355 XP_006711177 16 7355 XP_005273057 16 7355 XP_005273056 16 7355 XP_005273055 16 7355 NP_001074003 15 9605 NP_055677 15 9605 NP_982288 15 9605 XP_005254452 15 9605 XP_005254451 15 9605 XP_005246497 15 9605 NP_001243055 15 9605>NP_444256 Length = 1794 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 CASDIQSSS 9 CASDI+SSS Sbjct: 1270 CASDIRSSS 1278>NP_444254 Length = 1845 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 CASDIQSSS 9 CASDI+SSS Sbjct: 1270 CASDIRSSS 1278>NP_444253 Length = 1914 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 CASDIQSSS 9 CASDI+SSS Sbjct: 1339 CASDIRSSS 1347>NP_444255 Length = 1863 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 CASDIQSSS 9 CASDI+SSS Sbjct: 1339 CASDIRSSS 1347>XP_005247551 Length = 1855 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 CASDIQSSS 9 CASDI+SSS Sbjct: 1280 CASDIRSSS 1288>XP_005247550 Length = 1856 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 CASDIQSSS 9 CASDI+SSS Sbjct: 1349 CASDIRSSS 1357>XP_006713712 Length = 1923 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 CASDIQSSS 9 CASDI+SSS Sbjct: 1349 CASDIRSSS 1357>XP_005247549 Length = 1924 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 CASDIQSSS 9 CASDI+SSS Sbjct: 1349 CASDIRSSS 1357>NP_001001669 Length = 675 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 CASDIQS 7 CASDI+S Sbjct: 52 CASDIRS 58>NP_997254 Length = 908 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 C+SD +SSS Sbjct: 379 CSSDSESSS 387>XP_005252508 Length = 908 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 C+SD +SSS Sbjct: 379 CSSDSESSS 387>XP_006717511 Length = 908 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 C+SD +SSS Sbjct: 379 CSSDSESSS 387>XP_005252507 Length = 908 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 C+SD +SSS Sbjct: 379 CSSDSESSS 387>XP_006714848 Length = 638 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 CASDIQS 7 CASDI+S Sbjct: 52 CASDIRS 58>XP_005268504 Length = 675 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 CASDIQS 7 CASDI+S Sbjct: 52 CASDIRS 58>XP_006714847 Length = 675 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 CASDIQS 7 CASDI+S Sbjct: 52 CASDIRS 58>XP_006718479 Length = 414 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 C+S IQS+S Sbjct: 96 CSSPIQSAS 104>XP_006718474 Length = 897 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 C+S IQS+S Sbjct: 96 CSSPIQSAS 104>NP_149037 Length = 301 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 C++DI+S S Sbjct: 27 CSTDIESPS 35>NP_001171700 Length = 301 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 C++DI+S S Sbjct: 27 CSTDIESPS 35>NP_060422 Length = 689 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 CASDIQSS 8 CA+DI+S+ Sbjct: 551 CAADIKSA 558>NP_054733 Length = 2136 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 1580 CAADIQ 1585>NP_079255 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 36 CAADIQ 41>NP_006076 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 CA+D+Q+ + Sbjct: 42 CATDLQTKA 50>NP_001273079 Length = 272 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 CA+D+Q+ + Sbjct: 42 CATDLQTKA 50>NP_114120 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CASDIQSSS 9 C SD+Q S+ Sbjct: 94 CNSDLQDSA 102>NP_001106203 Length = 1125 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 38 CAADIQ 43>XP_005268181 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CASDIQSSS 9 C SD+Q S+ Sbjct: 94 CNSDLQDSA 102>XP_006720336 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CASDIQSSS 9 C SD+Q S+ Sbjct: 94 CNSDLQDSA 102>XP_006720335 Length = 645 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 CASDIQSSS 9 C SD+Q S+ Sbjct: 94 CNSDLQDSA 102>XP_005268373 Length = 984 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 36 CAADIQ 41>XP_005268372 Length = 1043 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 95 CAADIQ 100>XP_005268371 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 42 CAADIQ 47>XP_005268369 Length = 1132 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 20 CAADIQ 25>XP_006720029 Length = 1150 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 38 CAADIQ 43>XP_005268367 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 42 CAADIQ 47>XP_005268366 Length = 1180 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 68 CAADIQ 73>XP_005268365 Length = 1182 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 95 CAADIQ 100>XP_005268364 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 CASDIQ 6 CA+DIQ Sbjct: 95 CAADIQ 100>XP_005273062 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 CA+D+Q+ + Sbjct: 42 CATDLQTKA 50>XP_005273061 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 CA+D+Q+ + Sbjct: 42 CATDLQTKA 50>XP_006711177 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 CA+D+Q+ + Sbjct: 42 CATDLQTKA 50>XP_005273057 Length = 308 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 CA+D+Q+ + Sbjct: 42 CATDLQTKA 50>XP_005273056 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 CA+D+Q+ + Sbjct: 42 CATDLQTKA 50>XP_005273055 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 CASDIQSSS 9 CA+D+Q+ + Sbjct: 42 CATDLQTKA 50>NP_001074003 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CASDIQSSS 9 C SD+Q S Sbjct: 701 CHSDLQDDS 709>NP_055677 Length = 717 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SDIQSSS 9 +DIQSSS Sbjct: 548 NDIQSSS 554>NP_982288 Length = 384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SDIQSSS 9 SDI+SSS Sbjct: 341 SDIESSS 347>XP_005254452 Length = 2188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CASDIQSSS 9 C SD+Q S Sbjct: 701 CHSDLQDDS 709>XP_005254451 Length = 2214 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 CASDIQSSS 9 C SD+Q S Sbjct: 701 CHSDLQDDS 709>XP_005246497 Length = 200 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SDIQSSS 9 SDI+SSS Sbjct: 157 SDIESSS 163>NP_001243055 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SDIQSSS 9 SDI+SSS Sbjct: 349 SDIESSS 355Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.300 0.104 0.273 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 451,078 Number of extensions: 1094 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |