Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004351 19 869 NP_078858 17 3301 NP_001278232 17 3301 NP_001278214 17 3301 NP_001438 17 3301 XP_006714824 17 3301 NP_001783 17 4312 XP_005258239 17 4312 XP_005258238 17 4312 NP_005236 16 5631 XP_006714202 16 5631 XP_005262892 16 5631 XP_005262891 16 5631 NP_002244 16 7355 NP_001239268 16 7355 NP_001239267 16 7355 NP_001785 16 7355 NP_060109 16 7355 NP_001004480 16 7355 NP_001136245 15 9605 NP_001136239 15 9605 NP_001136236 15 9605 NP_001136244 15 9605 NP_001136238 15 9605 NP_001136240 15 9605 NP_001136243 15 9605 NP_001136242 15 9605 NP_001136235 15 9605 NP_001136237 15 9605 NP_001136241 15 9605 NP_149045 15 9605 NP_001784 15 9605 NP_001185463 15 9605 NP_001098991 15 9605 NP_003276 15 9605 NP_055061 15 9605 NP_061763 15 9605 XP_006724446 15 9605 XP_006718013 15 9605 XP_006717843 15 9605 XP_005252734 15 9605 XP_005252733 15 9605 XP_005252732 15 9605 XP_005252731 15 9605 XP_005252730 15 9605 XP_005252729 15 9605 NP_061822 15 9605>NP_004351 Length = 882 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 YTLVVQAA 9 YTLVVQAA Sbjct: 341 YTLVVQAA 348>NP_078858 Length = 4981 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AYTLVVQA 8 AY+LV+QA Sbjct: 1280 AYSLVIQA 1287>NP_001278232 Length = 4983 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AYTLVVQA 8 AY+LV+QA Sbjct: 1280 AYSLVIQA 1287>NP_001278214 Length = 4982 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AYTLVVQA 8 AY+LV+QA Sbjct: 1280 AYSLVIQA 1287>NP_001438 Length = 4349 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AYTLVVQA 8 +YTL++QA Sbjct: 114 SYTLIIQA 121>XP_006714824 Length = 4349 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AYTLVVQA 8 +YTL++QA Sbjct: 114 SYTLIIQA 121>NP_001783 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YTLVVQA 8 YTL++QA Sbjct: 345 YTLIIQA 351>XP_005258239 Length = 875 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YTLVVQA 8 YTL++QA Sbjct: 314 YTLIIQA 320>XP_005258238 Length = 888 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YTLVVQA 8 YTL++QA Sbjct: 327 YTLIIQA 333>NP_005236 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTLVVQAA 9 YTL VQA+ Sbjct: 3406 YTLTVQAS 3413>XP_006714202 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTLVVQAA 9 YTL VQA+ Sbjct: 3406 YTLTVQAS 3413>XP_005262892 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTLVVQAA 9 YTL VQA+ Sbjct: 3406 YTLTVQAS 3413>XP_005262891 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 YTLVVQAA 9 YTL VQA+ Sbjct: 3406 YTLTVQAS 3413>NP_002244 Length = 1356 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLVVQAA 9 TLV+QAA Sbjct: 516 TLVIQAA 522>NP_001239268 Length = 842 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YTLVVQA 8 YT++VQA Sbjct: 281 YTVIVQA 287>NP_001239267 Length = 879 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YTLVVQA 8 YT++VQA Sbjct: 318 YTVIVQA 324>NP_001785 Length = 916 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 YTLVVQA 8 YT++VQA Sbjct: 355 YTVIVQA 361>NP_060109 Length = 2916 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AYTLVVQA 8 +Y+L+VQA Sbjct: 1857 SYSLIVQA 1864>NP_001004480 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 AYTLVVQA 8 +YTLV++A Sbjct: 235 SYTLVIRA 242>NP_001136245 Length = 1932 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 557 YALTVQAA 564>NP_001136239 Length = 1915 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 542 YALTVQAA 549>NP_001136236 Length = 1957 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 579 YALTVQAA 586>NP_001136244 Length = 1677 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 579 YALTVQAA 586>NP_001136238 Length = 1952 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 579 YALTVQAA 586>NP_001136240 Length = 1935 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 557 YALTVQAA 564>NP_001136243 Length = 1682 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 584 YALTVQAA 591>NP_001136242 Length = 1539 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 579 YALTVQAA 586>NP_001136235 Length = 1962 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 584 YALTVQAA 591>NP_001136237 Length = 1886 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 579 YALTVQAA 586>NP_001136241 Length = 1790 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 591 YALTVQAA 598>NP_149045 Length = 1955 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 579 YALTVQAA 586>NP_001784 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YTLVVQA 8 YTL +QA Sbjct: 294 YTLTIQA 300>NP_001185463 Length = 243 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 YTLVV A Sbjct: 20 YTLVVSVA 27>NP_001098991 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYTLVVQA 8 A TLV+QA Sbjct: 171 ALTLVIQA 178>NP_003276 Length = 1358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 YTLVVQAA 9 YT+++QAA Sbjct: 1105 YTVLLQAA 1112>NP_055061 Length = 3014 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YTLVVQA 8 Y LVVQA Sbjct: 1070 YVLVVQA 1076>NP_061763 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 YTLVVQA 8 YTL +QA Sbjct: 315 YTLTIQA 321>XP_006724446 Length = 3019 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 YTLVVQA 8 Y LVVQA Sbjct: 1070 YVLVVQA 1076>XP_006718013 Length = 1778 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 YTLVVQAA 9 Y L VQAA Sbjct: 579 YALTVQAA 586>XP_006717843 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYTLVVQA 8 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252734 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYTLVVQA 8 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252733 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYTLVVQA 8 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252732 Length = 976 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYTLVVQA 8 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252731 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYTLVVQA 8 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252730 Length = 990 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYTLVVQA 8 A TLV+QA Sbjct: 171 ALTLVIQA 178>XP_005252729 Length = 990 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYTLVVQA 8 A TLV+QA Sbjct: 171 ALTLVIQA 178>NP_061822 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AYTLVV 6 AYTLVV Sbjct: 70 AYTLVV 75Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.122 0.304 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 275,333 Number of extensions: 366 Number of successful extensions: 47 Number of sequences better than 10000.0: 47 Number of HSP's gapped: 47 Number of HSP's successfully gapped: 47 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |