Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001120690 18 1482 NP_006221 18 1482 NP_001243808 18 1482 XP_006715808 18 1482 NP_000811 16 5631 NP_775792 16 7355 NP_001074020 16 7355 XP_006717039 16 7355 XP_006717038 16 7355 XP_005251795 16 7355 XP_006717037 16 7355 NP_115763 15 9605 NP_689549 15 9605 NP_002970 15 9605 NP_005161 15 9605 NP_001273700 15 9605 NP_444514 15 9605 NP_115593 15 9605 NP_942592 15 9605 NP_001007099 15 9605 NP_001180529 15 9605 XP_006725043 15 9605 XP_006725041 15 9605 XP_006725040 15 9605 XP_006725039 15 9605 XP_006725038 15 9605 XP_006725037 15 9605 XP_006722085 15 9605 XP_006722084 15 9605 XP_005257655 15 9605 XP_006722083 15 9605 XP_005257654 15 9605 XP_005257653 15 9605 XP_005257652 15 9605 XP_005265728 15 9605 XP_005265724 15 9605 XP_006712378 15 9605 XP_005263945 15 9605 XP_006712376 15 9605 XP_006712375 15 9605 XP_006712374 15 9605 XP_006712371 15 9605 XP_006711911 15 9605 XP_006711910 15 9605 XP_006711909 15 9605 XP_006711908 15 9605 XP_006711907 15 9605 XP_006711906 15 9605 XP_005271161 15 9605 XP_005271160 15 9605 NP_001366 15 9605>NP_001120690 Length = 469 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YSATQSAC 9 +SATQ+AC Sbjct: 431 FSATQTAC 438>NP_006221 Length = 504 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YSATQSAC 9 +SATQ+AC Sbjct: 466 FSATQTAC 473>NP_001243808 Length = 469 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YSATQSAC 9 +SATQ+AC Sbjct: 431 FSATQTAC 438>XP_006715808 Length = 488 Score = 18.1 bits (35), Expect = 1482 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 YSATQSAC 9 +SATQ+AC Sbjct: 450 FSATQTAC 457>NP_000811 Length = 678 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AYSATQSAC 9 AYS+ + AC Sbjct: 228 AYSSQEKAC 236>NP_775792 Length = 1444 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YSATQSAC 9 Y A Q+AC Sbjct: 1312 YGAQQTAC 1319>NP_001074020 Length = 1405 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YSATQSAC 9 Y A Q+AC Sbjct: 1273 YGAQQTAC 1280>XP_006717039 Length = 1370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YSATQSAC 9 Y A Q+AC Sbjct: 1238 YGAQQTAC 1245>XP_006717038 Length = 1473 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YSATQSAC 9 Y A Q+AC Sbjct: 1341 YGAQQTAC 1348>XP_005251795 Length = 1508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YSATQSAC 9 Y A Q+AC Sbjct: 1376 YGAQQTAC 1383>XP_006717037 Length = 1508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YSATQSAC 9 Y A Q+AC Sbjct: 1376 YGAQQTAC 1383>NP_115763 Length = 1243 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AYSATQSAC 9 +YS+T S C Sbjct: 575 SYSSTTSDC 583>NP_689549 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 YSATQSAC 9 YS QS+C Sbjct: 350 YSKDQSSC 357>NP_002970 Length = 547 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YSATQSAC 9 YSA AC Sbjct: 54 YSAVDQAC 61>NP_005161 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 AYSATQSAC 9 AYS+ S C Sbjct: 164 AYSSDDSGC 172>NP_001273700 Length = 2490 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 +TQSAC Sbjct: 2112 STQSAC 2117>NP_444514 Length = 548 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YSATQSAC 9 Y A Q AC Sbjct: 344 YEACQQAC 351>NP_115593 Length = 2603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 +TQSAC Sbjct: 2225 STQSAC 2230>NP_942592 Length = 2352 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 +TQSAC Sbjct: 1974 STQSAC 1979>NP_001007099 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YSATQSAC 9 YSA AC Sbjct: 54 YSAVDQAC 61>NP_001180529 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YSATQSAC 9 YSA AC Sbjct: 54 YSAVDQAC 61>XP_006725043 Length = 1593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006725041 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006725040 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006725039 Length = 1629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006725038 Length = 1646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006725037 Length = 1656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006722085 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AYSATQSAC 9 +YS+T S C Sbjct: 239 SYSSTTSDC 247>XP_006722084 Length = 943 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AYSATQSAC 9 +YS+T S C Sbjct: 239 SYSSTTSDC 247>XP_005257655 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AYSATQSAC 9 +YS+T S C Sbjct: 267 SYSSTTSDC 275>XP_006722083 Length = 1233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AYSATQSAC 9 +YS+T S C Sbjct: 575 SYSSTTSDC 583>XP_005257654 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AYSATQSAC 9 +YS+T S C Sbjct: 575 SYSSTTSDC 583>XP_005257653 Length = 1242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AYSATQSAC 9 +YS+T S C Sbjct: 575 SYSSTTSDC 583>XP_005257652 Length = 1279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AYSATQSAC 9 +YS+T S C Sbjct: 575 SYSSTTSDC 583>XP_005265728 Length = 2351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 +TQSAC Sbjct: 1973 STQSAC 1978>XP_005265724 Length = 2602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 +TQSAC Sbjct: 2224 STQSAC 2229>XP_006712378 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 ATQS+C Sbjct: 635 ATQSSC 640>XP_005263945 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 ATQS+C Sbjct: 635 ATQSSC 640>XP_006712376 Length = 677 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 ATQS+C Sbjct: 641 ATQSSC 646>XP_006712375 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 ATQS+C Sbjct: 641 ATQSSC 646>XP_006712374 Length = 721 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 ATQS+C Sbjct: 685 ATQSSC 690>XP_006712371 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 ATQSAC 9 ATQS+C Sbjct: 685 ATQSSC 690>XP_006711911 Length = 1593 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006711910 Length = 1610 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006711909 Length = 1620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006711908 Length = 1629 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006711907 Length = 1646 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_006711906 Length = 1656 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AYSATQSA 8 +YS TQSA Sbjct: 445 SYSFTQSA 452>XP_005271161 Length = 366 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YSATQSAC 9 YSA AC Sbjct: 54 YSAVDQAC 61>XP_005271160 Length = 463 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 2 YSATQSAC 9 YSA AC Sbjct: 54 YSAVDQAC 61>NP_001366 Length = 360 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AYSATQSAC 9 AYS SAC Sbjct: 143 AYSWPHSAC 151Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.309 0.102 0.296 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 396,761 Number of extensions: 773 Number of successful extensions: 51 Number of sequences better than 10000.0: 51 Number of HSP's gapped: 51 Number of HSP's successfully gapped: 51 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |