Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 18 1482 NP_653080 18 1482 XP_005267292 18 1482 XP_005267291 18 1482 XP_005267290 18 1482 NP_653297 16 5631 XP_006711224 16 5631 XP_006711223 16 5631 XP_006711222 16 5631 XP_006711221 16 5631 XP_006711220 16 5631 NP_005883 16 7355 XP_006722133 16 7355 XP_006722132 16 7355 XP_006722131 16 7355 XP_006722130 16 7355 XP_006722129 16 7355 XP_006722128 16 7355 XP_006722127 16 7355 XP_006722126 16 7355 XP_006722125 16 7355 NP_859061 16 7355 NP_037361 15 9605 NP_863651 15 9605 NP_078838 15 9605>NP_005091 Length = 1782 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVVLLSEYD 9 AVV LSEYD Sbjct: 845 AVVPLSEYD 853>NP_653080 Length = 1684 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVVLLSEYD 9 AVV LSEYD Sbjct: 747 AVVPLSEYD 755>XP_005267292 Length = 1677 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVVLLSEYD 9 AVV LSEYD Sbjct: 740 AVVPLSEYD 748>XP_005267291 Length = 1684 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVVLLSEYD 9 AVV LSEYD Sbjct: 747 AVVPLSEYD 755>XP_005267290 Length = 1782 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVVLLSEYD 9 AVV LSEYD Sbjct: 845 AVVPLSEYD 853>NP_653297 Length = 1012 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLLSEYD 9 VLLS+YD Sbjct: 534 VLLSKYD 540>XP_006711224 Length = 796 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLLSEYD 9 VLLS+YD Sbjct: 534 VLLSKYD 540>XP_006711223 Length = 913 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLLSEYD 9 VLLS+YD Sbjct: 534 VLLSKYD 540>XP_006711222 Length = 970 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLLSEYD 9 VLLS+YD Sbjct: 492 VLLSKYD 498>XP_006711221 Length = 976 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLLSEYD 9 VLLS+YD Sbjct: 534 VLLSKYD 540>XP_006711220 Length = 1012 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VLLSEYD 9 VLLS+YD Sbjct: 534 VLLSKYD 540>NP_005883 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVLLSEYD 9 V LLS+YD Sbjct: 53 VQLLSQYD 60>XP_006722133 Length = 1104 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVLLSEYD 9 V LLS+YD Sbjct: 53 VQLLSQYD 60>XP_006722132 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVLLSEYD 9 V LLS+YD Sbjct: 53 VQLLSQYD 60>XP_006722131 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVLLSEYD 9 V LLS+YD Sbjct: 53 VQLLSQYD 60>XP_006722130 Length = 1106 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVLLSEYD 9 V LLS+YD Sbjct: 53 VQLLSQYD 60>XP_006722129 Length = 1110 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVLLSEYD 9 V LLS+YD Sbjct: 53 VQLLSQYD 60>XP_006722128 Length = 1148 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVLLSEYD 9 V LLS+YD Sbjct: 53 VQLLSQYD 60>XP_006722127 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVLLSEYD 9 V LLS+YD Sbjct: 53 VQLLSQYD 60>XP_006722126 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVLLSEYD 9 V LLS+YD Sbjct: 53 VQLLSQYD 60>XP_006722125 Length = 1164 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VVLLSEYD 9 V LLS+YD Sbjct: 53 VQLLSQYD 60>NP_859061 Length = 429 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVVLLSEYD 9 A+VL+ YD Sbjct: 157 AIVLIRRYD 165>NP_037361 Length = 1237 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVVLLSEY 8 AVV LS+Y Sbjct: 844 AVVALSQY 851>NP_863651 Length = 1248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVVLLSEY 8 AVV LS+Y Sbjct: 855 AVVALSQY 862>NP_078838 Length = 1094 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 VLLSEYD 9 VLLS YD Sbjct: 842 VLLSAYD 848Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.136 0.341 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 395,717 Number of extensions: 537 Number of successful extensions: 25 Number of sequences better than 10000.0: 25 Number of HSP's gapped: 25 Number of HSP's successfully gapped: 25 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |