Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001138389 18 1482 NP_001138390 18 1482 NP_001138386 18 1482 NP_001138387 18 1482 NP_000132 18 1482 NP_075259 18 1482 NP_001138388 18 1482 NP_001138391 18 1482 NP_001138385 18 1482 NP_075418 18 1482 XP_006717776 18 1482 XP_006717775 18 1482 XP_006717774 18 1482 XP_006717773 18 1482 XP_006717772 18 1482 XP_006717771 18 1482 NP_001156685 17 4312 NP_000133 17 4312 NP_075254 17 4312 XP_006713936 17 4312 XP_006713935 17 4312 XP_006713934 17 4312 XP_006713933 17 4312 XP_006713932 17 4312 XP_006713931 17 4312 NP_061146 16 7355 NP_954872 16 7355 NP_001027466 15 9605 NP_000053 15 9605>NP_001138389 Length = 705 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 395 AVTVAVKML 403>NP_001138390 Length = 704 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 394 AVTVAVKML 402>NP_001138386 Length = 709 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 399 AVTVAVKML 407>NP_001138387 Length = 707 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 422 AVTVAVKML 430>NP_000132 Length = 821 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 511 AVTVAVKML 519>NP_075259 Length = 822 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 512 AVTVAVKML 520>NP_001138388 Length = 706 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 396 AVTVAVKML 404>NP_001138391 Length = 680 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 423 AVTVAVKML 431>NP_001138385 Length = 769 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 512 AVTVAVKML 520>NP_075418 Length = 732 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 422 AVTVAVKML 430>XP_006717776 Length = 806 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 530 AVTVAVKML 538>XP_006717775 Length = 726 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 416 AVTVAVKML 424>XP_006717774 Length = 752 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 442 AVTVAVKML 450>XP_006717773 Length = 807 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 531 AVTVAVKML 539>XP_006717772 Length = 838 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 528 AVTVAVKML 536>XP_006717771 Length = 839 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVTVVVKML 9 AVTV VKML Sbjct: 529 AVTVAVKML 537>NP_001156685 Length = 808 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVVVKML 9 VTV VKML Sbjct: 505 VTVAVKML 512>NP_000133 Length = 806 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVVVKML 9 VTV VKML Sbjct: 503 VTVAVKML 510>NP_075254 Length = 694 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVVVKML 9 VTV VKML Sbjct: 391 VTVAVKML 398>XP_006713936 Length = 807 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVVVKML 9 VTV VKML Sbjct: 503 VTVAVKML 510>XP_006713935 Length = 807 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVVVKML 9 VTV VKML Sbjct: 504 VTVAVKML 511>XP_006713934 Length = 809 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVVVKML 9 VTV VKML Sbjct: 505 VTVAVKML 512>XP_006713933 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVVVKML 9 VTV VKML Sbjct: 506 VTVAVKML 513>XP_006713932 Length = 810 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVVVKML 9 VTV VKML Sbjct: 507 VTVAVKML 514>XP_006713931 Length = 811 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 VTVVVKML 9 VTV VKML Sbjct: 507 VTVAVKML 514>NP_061146 Length = 852 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VTVVVKML 9 VTVV+K+L Sbjct: 215 VTVVLKLL 222>NP_954872 Length = 799 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VTVVVKML 9 VTVV+K+L Sbjct: 215 VTVVLKLL 222>NP_001027466 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVTVVVKML 9 A TV+ KML Sbjct: 46 ATTVISKML 54>NP_000053 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVTVVVKML 9 A TV+ KML Sbjct: 46 ATTVISKML 54Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.335 0.136 0.315 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 219,298 Number of extensions: 157 Number of successful extensions: 29 Number of sequences better than 10000.0: 29 Number of HSP's gapped: 29 Number of HSP's successfully gapped: 29 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.4 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |