Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245210 20 390 NP_000242 20 390 XP_005264389 20 390 NP_000285 17 3301 NP_001165903 17 3301 XP_005255422 17 3301 XP_006721117 17 3301 XP_005255421 17 3301 XP_005255420 17 3301 NP_059138 17 4312 NP_001032360 17 4312 NP_003742 17 4312 NP_001073982 16 5631 NP_071351 16 5631 XP_006726572 16 5631 XP_006726571 16 5631 XP_006726570 16 5631 XP_003960511 16 5631 XP_006717414 16 5631 XP_005269338 16 5631 XP_005269337 16 5631 XP_006710283 16 5631 XP_006710282 16 5631 NP_001005289 16 5631 NP_006517 16 7355 NP_001027549 16 7355 NP_001230352 16 7355 XP_006724219 16 7355 XP_006724218 16 7355 XP_006724217 16 7355 XP_006716981 16 7355 XP_006716980 16 7355 XP_005272572 16 7355 XP_005272573 16 7355 XP_005264365 16 7355 XP_005264364 16 7355 NP_689726 16 7355 NP_149350 16 7355 NP_001267 15 9605 NP_055325 15 9605 NP_149015 15 9605 NP_001127951 15 9605 NP_060573 15 9605 NP_036505 15 9605 XP_005276733 15 9605 XP_005259517 15 9605 XP_006715989 15 9605 XP_005271048 15 9605>NP_001245210 Length = 868 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSFAHVSN 9 VSFAHVSN Sbjct: 540 VSFAHVSN 547>NP_000242 Length = 934 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSFAHVSN 9 VSFAHVSN Sbjct: 606 VSFAHVSN 613>XP_005264389 Length = 921 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 VSFAHVSN 9 VSFAHVSN Sbjct: 606 VSFAHVSN 613>NP_000285 Length = 406 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 AVSF H +N Sbjct: 140 AVSFLHANN 148>NP_001165903 Length = 374 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 AVSF H +N Sbjct: 140 AVSFLHANN 148>XP_005255422 Length = 301 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 AVSF H +N Sbjct: 31 AVSFLHANN 39>XP_006721117 Length = 301 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 AVSF H +N Sbjct: 31 AVSFLHANN 39>XP_005255421 Length = 308 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 AVSF H +N Sbjct: 38 AVSFLHANN 46>XP_005255420 Length = 410 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 AVSF H +N Sbjct: 140 AVSFLHANN 148>NP_059138 Length = 1032 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VSFAHVS 8 VSFAH+S Sbjct: 349 VSFAHLS 355>NP_001032360 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 +VSF HV N Sbjct: 588 SVSFYHVKN 596>NP_003742 Length = 814 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 +VSF HV N Sbjct: 588 SVSFYHVKN 596>NP_001073982 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFAHVSN 9 +FAH+SN Sbjct: 308 TFAHLSN 314>NP_071351 Length = 2752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSFAHVS 8 AVSF H+S Sbjct: 1834 AVSFEHLS 1841>XP_006726572 Length = 2066 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSFAHV 7 AVSF HV Sbjct: 1209 AVSFVHV 1215>XP_006726571 Length = 3681 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSFAHV 7 AVSF HV Sbjct: 2865 AVSFVHV 2871>XP_006726570 Length = 3722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSFAHV 7 AVSF HV Sbjct: 2865 AVSFVHV 2871>XP_003960511 Length = 3722 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSFAHV 7 AVSF HV Sbjct: 2865 AVSFVHV 2871>XP_006717414 Length = 5100 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSFAHV 7 AVSF HV Sbjct: 4243 AVSFVHV 4249>XP_005269338 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFAHVSN 9 +FAH+SN Sbjct: 308 TFAHLSN 314>XP_005269337 Length = 545 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFAHVSN 9 +FAH+SN Sbjct: 308 TFAHLSN 314>XP_006710283 Length = 2066 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSFAHV 7 AVSF HV Sbjct: 1209 AVSFVHV 1215>XP_006710282 Length = 2621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSFAHV 7 AVSF HV Sbjct: 1764 AVSFVHV 1770>NP_001005289 Length = 320 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVSFAHV 7 AVS+AH+ Sbjct: 223 AVSYAHI 229>NP_006517 Length = 1048 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSFAHVSN 9 VS+ H+SN Sbjct: 1017 VSYQHLSN 1024>NP_001027549 Length = 265 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSFAHVSN 9 AVSF H N Sbjct: 108 AVSFLHFHN 116>NP_001230352 Length = 70 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSFAHVSN 9 V+ AH+SN Sbjct: 51 VTVAHISN 58>XP_006724219 Length = 1157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 AVS +H+ N Sbjct: 1149 AVSLSHIRN 1157>XP_006724218 Length = 1200 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 AVS +H+ N Sbjct: 1192 AVSLSHIRN 1200>XP_006724217 Length = 1235 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 AVS +H+ N Sbjct: 1227 AVSLSHIRN 1235>XP_006716981 Length = 1053 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFAHVS 8 SFAH+S Sbjct: 632 SFAHIS 637>XP_006716980 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFAHVS 8 SFAH+S Sbjct: 638 SFAHIS 643>XP_005272572 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFAHVS 8 SFAH+S Sbjct: 638 SFAHIS 643>XP_005272573 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFAHVS 8 SFAH+S Sbjct: 638 SFAHIS 643>XP_005264365 Length = 198 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSFAHVSN 9 AVSF H N Sbjct: 41 AVSFLHFHN 49>XP_005264364 Length = 288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSFAHVSN 9 AVSF H N Sbjct: 131 AVSFLHFHN 139>NP_689726 Length = 1274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVSFAHVSN 9 AVS +H+ N Sbjct: 1266 AVSLSHIRN 1274>NP_149350 Length = 1059 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SFAHVS 8 SFAH+S Sbjct: 638 SFAHIS 643>NP_001267 Length = 383 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFAHVSN 9 SFA++SN Sbjct: 57 SFANISN 63>NP_055325 Length = 4935 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSFAHVSN 9 VSF+H S+ Sbjct: 4326 VSFSHASS 4333>NP_149015 Length = 5142 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSFAHVSN 9 VSF+H S+ Sbjct: 4326 VSFSHASS 4333>NP_001127951 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 AVSFAHV 7 A+SF HV Sbjct: 332 AISFEHV 338>NP_060573 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 AVSFAHV 7 A+SF HV Sbjct: 332 AISFEHV 338>NP_036505 Length = 321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVSFAHV 7 +VS+AHV Sbjct: 224 SVSYAHV 230>XP_005276733 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFAHVSN 9 SFAH+S+ Sbjct: 65 SFAHLSS 71>XP_005259517 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SFAHVSN 9 SFAH+S+ Sbjct: 65 SFAHLSS 71>XP_006715989 Length = 5148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSFAHVSN 9 VSF+H S+ Sbjct: 4326 VSFSHASS 4333>XP_005271048 Length = 858 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 AVSFAHV 7 A+SF HV Sbjct: 332 AISFEHV 338Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.116 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 450,055 Number of extensions: 683 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |