Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 18 1935 NP_671714 18 1935 XP_006715890 18 1935 XP_005250160 18 1935 XP_005250159 18 1935 NP_114104 17 4312 NP_002842 17 4312 XP_005250576 17 4312 NP_078966 16 5631 NP_640337 16 7355 NP_001121187 16 7355 NP_001275707 16 7355 NP_075463 16 7355 NP_004415 16 7355 XP_006720921 16 7355 XP_006720920 16 7355 XP_005255213 16 7355 XP_005255212 16 7355 XP_006719812 16 7355 XP_006715402 16 7355 NP_740754 15 9605 NP_061336 15 9605 NP_055591 15 9605 NP_631940 15 9605 NP_476511 15 9605 NP_001128686 15 9605 NP_001128685 15 9605 NP_476510 15 9605 XP_006721701 15 9605 XP_006719777 15 9605 XP_006719776 15 9605 XP_006719775 15 9605 XP_006719774 15 9605 XP_006719773 15 9605 XP_005254057 15 9605 XP_006719772 15 9605 XP_006719771 15 9605 XP_006719770 15 9605 XP_005254054 15 9605>NP_005742 Length = 3907 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVSESTVLP 9 AVSESTV P Sbjct: 1374 AVSESTVPP 1382>NP_671714 Length = 3899 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVSESTVLP 9 AVSESTV P Sbjct: 1374 AVSESTVPP 1382>XP_006715890 Length = 3860 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVSESTVLP 9 AVSESTV P Sbjct: 1374 AVSESTVPP 1382>XP_005250160 Length = 3939 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVSESTVLP 9 AVSESTV P Sbjct: 1374 AVSESTVPP 1382>XP_005250159 Length = 3952 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVSESTVLP 9 AVSESTV P Sbjct: 1374 AVSESTVPP 1382>NP_114104 Length = 490 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 VSE+T+LP Sbjct: 75 VSENTMLP 82>NP_002842 Length = 2315 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SESTVLP 9 SESTV+P Sbjct: 1066 SESTVMP 1072>XP_005250576 Length = 2308 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SESTVLP 9 SESTV+P Sbjct: 1066 SESTVMP 1072>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 SESTVLP 9 S+STVLP Sbjct: 7000 SQSTVLP 7006>NP_640337 Length = 1115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSESTVLP 9 +SE TV+P Sbjct: 699 ISEGTVVP 706>NP_001121187 Length = 1151 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSESTVLP 9 +SE TV+P Sbjct: 699 ISEGTVVP 706>NP_001275707 Length = 607 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSESTVL 8 A+SE TVL Sbjct: 553 AISEGTVL 560>NP_075463 Length = 3013 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSESTVLP 9 AVS+S LP Sbjct: 803 AVSDSATLP 811>NP_004415 Length = 784 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSESTVL 8 A+SE TVL Sbjct: 730 AISEGTVL 737>XP_006720921 Length = 783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSESTVL 8 A+SE TVL Sbjct: 729 AISEGTVL 736>XP_006720920 Length = 785 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSESTVL 8 A+SE TVL Sbjct: 731 AISEGTVL 738>XP_005255213 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSESTVL 8 A+SE TVL Sbjct: 782 AISEGTVL 789>XP_005255212 Length = 837 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSESTVL 8 A+SE TVL Sbjct: 783 AISEGTVL 790>XP_006719812 Length = 3019 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSESTVLP 9 AVS+S LP Sbjct: 800 AVSDSATLP 808>XP_006715402 Length = 1135 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSESTVLP 9 +SE TV+P Sbjct: 699 ISEGTVVP 706>NP_740754 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSESTVLP 9 V +STVLP Sbjct: 209 VIDSTVLP 216>NP_061336 Length = 570 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VSESTVLP 9 V +STVLP Sbjct: 209 VIDSTVLP 216>NP_055591 Length = 679 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>NP_631940 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>NP_476511 Length = 631 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>NP_001128686 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>NP_001128685 Length = 681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 310 VTETTVVP 317>NP_476510 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>XP_006721701 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SESTVLP 9 SES++LP Sbjct: 21 SESSILP 27>XP_006719777 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>XP_006719776 Length = 456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>XP_006719775 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>XP_006719774 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>XP_006719773 Length = 674 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>XP_005254057 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 307 VTETTVVP 314>XP_006719772 Length = 709 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>XP_006719771 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>XP_006719770 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 308 VTETTVVP 315>XP_005254054 Length = 758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VSESTVLP 9 V+E+TV+P Sbjct: 307 VTETTVVP 314Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.298 0.112 0.271 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 322,595 Number of extensions: 470 Number of successful extensions: 39 Number of sequences better than 10000.0: 39 Number of HSP's gapped: 39 Number of HSP's successfully gapped: 39 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |