Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_113662 18 1135 XP_005253855 18 1135 XP_005253854 18 1135 XP_005253853 18 1135 XP_006721884 17 2528 XP_005257286 17 2528 NP_000207 17 3301 XP_005274558 17 3301 NP_536799 17 4312 NP_821079 17 4312 NP_079511 17 4312 NP_003738 17 4312 XP_005270242 17 4312 XP_006716326 17 4312 NP_061846 16 5631 NP_714963 16 5631 NP_000675 16 5631 NP_055884 16 5631 NP_001258549 16 5631 NP_065891 16 5631 NP_005551 16 5631 XP_006723859 16 5631 XP_005255914 16 5631 XP_005255913 16 5631 XP_005255912 16 5631 XP_006721234 16 5631 XP_006714344 16 5631 XP_005263218 16 5631 XP_005263217 16 5631 XP_005263216 16 5631 XP_005263215 16 5631 XP_005263213 16 5631 NP_005021 16 7355 NP_852466 16 7355 NP_443100 16 7355 NP_001193594 16 7355 XP_006724942 16 7355 XP_005265160 16 7355 XP_006713189 16 7355 XP_005265159 16 7355 XP_006711694 16 7355 XP_005245671 16 7355 XP_006710331 16 7355 NP_002011 15 9605 NP_002323 15 9605 NP_891555 15 9605 NP_001035373 15 9605 NP_073617 15 9605 XP_005259205 15 9605 XP_005259203 15 9605 XP_006723383 15 9605 XP_006719839 15 9605 XP_005252850 15 9605 XP_006710034 15 9605 NP_699202 15 9605 NP_001004474 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVSAGCLA 8 AVSAGCLA Sbjct: 2875 AVSAGCLA 2882>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVSAGCLA 8 AVSAGCLA Sbjct: 2875 AVSAGCLA 2882>NP_113662 Length = 281 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSAGCLAR 9 +SAGCL+R Sbjct: 184 ISAGCLSR 191>XP_005253855 Length = 279 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSAGCLAR 9 +SAGCL+R Sbjct: 184 ISAGCLSR 191>XP_005253854 Length = 281 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSAGCLAR 9 +SAGCL+R Sbjct: 184 ISAGCLSR 191>XP_005253853 Length = 294 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 VSAGCLAR 9 +SAGCL+R Sbjct: 184 ISAGCLSR 191>XP_006721884 Length = 461 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSAGCLAR 9 A S+GCL R Sbjct: 448 AASSGCLTR 456>XP_005257286 Length = 562 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVSAGCLAR 9 A S+GCL R Sbjct: 549 AASSGCLTR 557>NP_000207 Length = 680 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSAGCLA 8 A S+GCLA Sbjct: 17 AASSGCLA 24>XP_005274558 Length = 420 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSAGCLA 8 A S+GCLA Sbjct: 17 AASSGCLA 24>NP_536799 Length = 445 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SAGCLA 8 SAGCLA Sbjct: 21 SAGCLA 26>NP_821079 Length = 581 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 AVSAGCL 7 ++SAGCL Sbjct: 58 SISAGCL 64>NP_079511 Length = 1166 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSAGCLAR 9 A GCLAR Sbjct: 652 AAKKGCLAR 660>NP_003738 Length = 1327 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSAGCLAR 9 A GCLAR Sbjct: 810 AAKKGCLAR 818>XP_005270242 Length = 734 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSAGCLAR 9 A GCLAR Sbjct: 220 AAKKGCLAR 228>XP_006716326 Length = 1316 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSAGCLAR 9 A GCLAR Sbjct: 810 AAKKGCLAR 818>NP_061846 Length = 122 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSAGCLA 8 VSAGC A Sbjct: 77 VSAGCYA 83>NP_714963 Length = 92 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSAGCLA 8 VSAGC A Sbjct: 47 VSAGCYA 53>NP_000675 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 SAGCLAR 9 ++GCLAR Sbjct: 411 ASGCLAR 417>NP_055884 Length = 1284 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGCLAR 9 AGC+AR Sbjct: 1093 AGCMAR 1098>NP_001258549 Length = 1224 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGCLAR 9 AGC+AR Sbjct: 1033 AGCMAR 1038>NP_065891 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSAGCL 7 A SAGCL Sbjct: 628 ACSAGCL 634>NP_005551 Length = 3695 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSAGCLA 8 VSAGC A Sbjct: 3111 VSAGCTA 3117>XP_006723859 Length = 3700 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VSAGCLA 8 VSAGC A Sbjct: 3111 VSAGCTA 3117>XP_005255914 Length = 1167 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGCLAR 9 AGC+AR Sbjct: 976 AGCMAR 981>XP_005255913 Length = 1224 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGCLAR 9 AGC+AR Sbjct: 1033 AGCMAR 1038>XP_005255912 Length = 1286 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGCLAR 9 AGC+AR Sbjct: 1095 AGCMAR 1100>XP_006721234 Length = 1299 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AGCLAR 9 AGC+AR Sbjct: 1108 AGCMAR 1113>XP_006714344 Length = 760 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSAGCL 7 A SAGCL Sbjct: 274 ACSAGCL 280>XP_005263218 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSAGCL 7 A SAGCL Sbjct: 681 ACSAGCL 687>XP_005263217 Length = 1061 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSAGCL 7 A SAGCL Sbjct: 681 ACSAGCL 687>XP_005263216 Length = 1137 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSAGCL 7 A SAGCL Sbjct: 651 ACSAGCL 657>XP_005263215 Length = 1144 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSAGCL 7 A SAGCL Sbjct: 658 ACSAGCL 664>XP_005263213 Length = 1167 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 AVSAGCL 7 A SAGCL Sbjct: 681 ACSAGCL 687>NP_005021 Length = 603 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AVSAGCLAR 9 AV+AG LAR Sbjct: 4 AVTAGKLAR 12>NP_852466 Length = 1031 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSAGCLA 8 AVS+GC A Sbjct: 335 AVSSGCPA 342>NP_443100 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSAGCLAR 9 ++ GCLAR Sbjct: 182 LALGCLAR 189>NP_001193594 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSAGCLAR 9 ++ GCLAR Sbjct: 182 LALGCLAR 189>XP_006724942 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAGCLA 8 SAGC+A Sbjct: 595 SAGCMA 600>XP_005265160 Length = 826 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSAGCLA 8 AVS+GC A Sbjct: 130 AVSSGCPA 137>XP_006713189 Length = 1019 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSAGCLA 8 AVS+GC A Sbjct: 323 AVSSGCPA 330>XP_005265159 Length = 1031 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 AVSAGCLA 8 AVS+GC A Sbjct: 335 AVSSGCPA 342>XP_006711694 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSAGCLAR 9 ++ GCLAR Sbjct: 165 LALGCLAR 172>XP_005245671 Length = 613 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VSAGCLAR 9 ++ GCLAR Sbjct: 182 LALGCLAR 189>XP_006710331 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAGCLA 8 SAGC+A Sbjct: 595 SAGCMA 600>NP_002011 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GCLAR 9 GCLAR Sbjct: 1238 GCLAR 1242>NP_002323 Length = 4544 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 AVSAGCL 7 +++AGCL Sbjct: 2807 SIAAGCL 2813>NP_891555 Length = 1363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GCLAR 9 GCLAR Sbjct: 1238 GCLAR 1242>NP_001035373 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSAGCLAR 9 A A CLAR Sbjct: 273 ASGASCLAR 281>NP_073617 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SAGCLA 8 SAGC+A Sbjct: 287 SAGCVA 292>XP_005259205 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSAGCLAR 9 A A CLAR Sbjct: 273 ASGASCLAR 281>XP_005259203 Length = 370 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSAGCLAR 9 A A CLAR Sbjct: 276 ASGASCLAR 284>XP_006723383 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 AVSAGCLAR 9 A A CLAR Sbjct: 324 ASGASCLAR 332>XP_006719839 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GCLAR 9 GCLAR Sbjct: 382 GCLAR 386>XP_005252850 Length = 635 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVSAGCLAR 9 + S+GC+A+ Sbjct: 5 SASSGCVAK 13>XP_006710034 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 VSAGCLA 8 VSAGC + Sbjct: 214 VSAGCFS 220>NP_699202 Length = 690 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 GCLAR 9 GCLAR Sbjct: 505 GCLAR 509>NP_001004474 Length = 331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 VSAGCL 7 V+AGCL Sbjct: 220 VAAGCL 225Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.128 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 546,045 Number of extensions: 579 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |