Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 19 869 XP_006718908 19 869 XP_005271621 19 869 XP_006718907 19 869 XP_006718906 19 869 XP_005271619 19 869 XP_005271618 19 869 XP_006712096 17 2528 XP_006712095 17 2528 XP_005264430 17 2528 XP_006712094 17 2528 XP_006712093 17 2528 XP_005264429 17 2528 NP_060022 17 2528 NP_001229267 17 2528 NP_066010 17 3301 NP_057565 16 5631 NP_006566 16 5631 NP_942089 16 5631 XP_006720077 16 5631 XP_006720076 16 5631 XP_005252107 16 5631 XP_005252106 16 5631 XP_005252105 16 5631 XP_005252104 16 5631 NP_001166203 16 7355 NP_068557 16 7355 NP_002174 16 7355 NP_001254642 16 7355 NP_001166210 16 7355 NP_001166214 16 7355 XP_005274838 16 7355 XP_005274837 16 7355 XP_006724523 16 7355 XP_006724522 16 7355 XP_005274489 16 7355 XP_005274488 16 7355 XP_006720778 16 7355 XP_006720777 16 7355 XP_006720776 16 7355 XP_006720775 16 7355>NP_000042 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVMQQVFPM 9 AVMQQVF M Sbjct: 2726 AVMQQVFQM 2734>XP_006718908 Length = 1708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVMQQVFPM 9 AVMQQVF M Sbjct: 1378 AVMQQVFQM 1386>XP_005271621 Length = 2708 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVMQQVFPM 9 AVMQQVF M Sbjct: 2378 AVMQQVFQM 2386>XP_006718907 Length = 3050 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVMQQVFPM 9 AVMQQVF M Sbjct: 2720 AVMQQVFQM 2728>XP_006718906 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVMQQVFPM 9 AVMQQVF M Sbjct: 2726 AVMQQVFQM 2734>XP_005271619 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVMQQVFPM 9 AVMQQVF M Sbjct: 2726 AVMQQVFQM 2734>XP_005271618 Length = 3056 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVMQQVFPM 9 AVMQQVF M Sbjct: 2726 AVMQQVFQM 2734>XP_006712096 Length = 802 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AVMQQVFP 8 AV+Q+VFP Sbjct: 36 AVLQKVFP 43>XP_006712095 Length = 849 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AVMQQVFP 8 AV+Q+VFP Sbjct: 706 AVLQKVFP 713>XP_005264430 Length = 1044 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AVMQQVFP 8 AV+Q+VFP Sbjct: 278 AVLQKVFP 285>XP_006712094 Length = 1067 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AVMQQVFP 8 AV+Q+VFP Sbjct: 706 AVLQKVFP 713>XP_006712093 Length = 1460 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AVMQQVFP 8 AV+Q+VFP Sbjct: 706 AVLQKVFP 713>XP_005264429 Length = 1472 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AVMQQVFP 8 AV+Q+VFP Sbjct: 706 AVLQKVFP 713>NP_060022 Length = 1458 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AVMQQVFP 8 AV+Q+VFP Sbjct: 692 AVLQKVFP 699>NP_001229267 Length = 1453 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 AVMQQVFP 8 AV+Q+VFP Sbjct: 692 AVLQKVFP 699>NP_066010 Length = 1232 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VMQQVFPM 9 ++QQVFP+ Sbjct: 204 IIQQVFPV 211>NP_057565 Length = 441 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVMQQVFPM 9 A +QQ FPM Sbjct: 238 ARIQQAFPM 246>NP_006566 Length = 846 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVMQQVFP 8 A M+Q+FP Sbjct: 544 ATMEQLFP 551>NP_942089 Length = 846 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVMQQVFP 8 A M+Q+FP Sbjct: 544 ATMEQLFP 551>XP_006720077 Length = 489 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVMQQVFP 8 A M+Q+FP Sbjct: 187 ATMEQLFP 194>XP_006720076 Length = 846 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVMQQVFP 8 A M+Q+FP Sbjct: 544 ATMEQLFP 551>XP_005252107 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVMQQVFPM 9 A +QQ FPM Sbjct: 92 ARIQQAFPM 100>XP_005252106 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVMQQVFPM 9 A +QQ FPM Sbjct: 92 ARIQQAFPM 100>XP_005252105 Length = 295 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVMQQVFPM 9 A +QQ FPM Sbjct: 92 ARIQQAFPM 100>XP_005252104 Length = 399 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 AVMQQVFPM 9 A +QQ FPM Sbjct: 238 ARIQQAFPM 246>NP_001166203 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVMQQVFP 8 AV+Q +FP Sbjct: 136 AVLQNLFP 143>NP_068557 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVMQQVFP 8 AV+Q +FP Sbjct: 186 AVLQNLFP 193>NP_002174 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VMQQVFP 8 VMQ++FP Sbjct: 330 VMQRLFP 336>NP_001254642 Length = 300 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VMQQVFP 8 VMQ++FP Sbjct: 252 VMQRLFP 258>NP_001166210 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVMQQVFP 8 AV+Q +FP Sbjct: 186 AVLQNLFP 193>NP_001166214 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVMQQVFP 8 AV+Q +FP Sbjct: 186 AVLQNLFP 193>XP_005274838 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VMQQVFP 8 VMQ++FP Sbjct: 329 VMQRLFP 335>XP_005274837 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VMQQVFP 8 VMQ++FP Sbjct: 330 VMQRLFP 336>XP_006724523 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVMQQVFP 8 AV+Q +FP Sbjct: 186 AVLQNLFP 193>XP_006724522 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 AVMQQVFP 8 AV+Q +FP Sbjct: 186 AVLQNLFP 193>XP_005274489 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VMQQVFP 8 VMQ++FP Sbjct: 329 VMQRLFP 335>XP_005274488 Length = 378 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VMQQVFP 8 VMQ++FP Sbjct: 330 VMQRLFP 336>XP_006720778 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VMQQVFP 8 V QQVFP Sbjct: 72 VHQQVFP 78>XP_006720777 Length = 292 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VMQQVFP 8 V QQVFP Sbjct: 106 VHQQVFP 112>XP_006720776 Length = 375 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VMQQVFP 8 V QQVFP Sbjct: 189 VHQQVFP 195>XP_006720775 Length = 497 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 VMQQVFP 8 V QQVFP Sbjct: 311 VHQQVFP 317Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.341 0.135 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 414,816 Number of extensions: 388 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |