Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 509 NP_001091680 20 509 NP_001091679 20 509 XP_006713048 20 509 XP_006713047 20 509 XP_006713046 20 509 XP_005264943 20 509 NP_002221 18 1482 NP_068831 18 1482 XP_006721941 18 1482 XP_006721940 18 1482 XP_006721939 18 1482 XP_006721938 18 1482 XP_006721937 18 1482 XP_006721936 18 1482 XP_006721935 18 1482 XP_006721934 18 1482 XP_005257370 18 1482 NP_005498 17 3301 NP_060233 17 4312 XP_006713184 17 4312 NP_000830 17 4312 NP_005361 16 5631 NP_059344 16 5631 NP_006331 16 5631 NP_059345 16 5631 XP_005257005 16 5631 XP_006721701 16 5631 XP_006721700 16 5631 XP_005257002 16 5631 XP_005257001 16 5631 XP_006721699 16 5631 XP_006721698 16 5631 XP_005257000 16 5631 NP_001138360 16 5631 NP_060546 16 7355 NP_001276949 16 7355 NP_001276950 16 7355 NP_619579 16 7355 NP_068733 16 7355 NP_001230574 16 7355 NP_001135799 16 7355 NP_001135798 16 7355 NP_055866 16 7355 NP_066968 16 7355 XP_005252542 16 7355 XP_006717518 16 7355 XP_006717517 16 7355 XP_006717516 16 7355 XP_006716268 16 7355 XP_006716267 16 7355 XP_006716266 16 7355 XP_005250791 16 7355 XP_006716265 16 7355 XP_006716264 16 7355 XP_006716263 16 7355 XP_006716262 16 7355 XP_006716261 16 7355 XP_006716260 16 7355 NP_066008 15 9605 NP_001758 15 9605 NP_005094 15 9605 XP_005271792 15 9605 XP_005271791 15 9605 XP_005271377 15 9605 XP_005271376 15 9605>NP_001895 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF+MSED Sbjct: 657 AVLFRMSED 665>NP_001091680 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF+MSED Sbjct: 657 AVLFRMSED 665>NP_001091679 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF+MSED Sbjct: 657 AVLFRMSED 665>XP_006713048 Length = 720 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF+MSED Sbjct: 657 AVLFRMSED 665>XP_006713047 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF+MSED Sbjct: 650 AVLFRMSED 658>XP_006713046 Length = 774 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF+MSED Sbjct: 650 AVLFRMSED 658>XP_005264943 Length = 781 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF+MSED Sbjct: 657 AVLFRMSED 665>NP_002221 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 647 AVLFRISED 655>NP_068831 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 647 AVLFRISED 655>XP_006721941 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 647 AVLFRISED 655>XP_006721940 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 647 AVLFRISED 655>XP_006721939 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 647 AVLFRISED 655>XP_006721938 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 647 AVLFRISED 655>XP_006721937 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 647 AVLFRISED 655>XP_006721936 Length = 745 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 647 AVLFRISED 655>XP_006721935 Length = 762 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 664 AVLFRISED 672>XP_006721934 Length = 783 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 685 AVLFRISED 693>XP_005257370 Length = 783 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 AVLFQMSED 9 AVLF++SED Sbjct: 685 AVLFRISED 693>NP_005498 Length = 166 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 AVLFQMSED 9 AVLF +SED Sbjct: 35 AVLFCLSED 43>NP_060233 Length = 783 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVLFQMSED 9 AVLF ++ED Sbjct: 136 AVLFDITED 144>XP_006713184 Length = 872 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AVLFQMSED 9 AVLF SED Sbjct: 266 AVLFTRSED 274>NP_000830 Length = 872 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 AVLFQMSED 9 AVLF SED Sbjct: 266 AVLFTRSED 274>NP_005361 Length = 207 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 VLFQMSED 9 VLF+ SED Sbjct: 24 VLFRFSED 31>NP_059344 Length = 521 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 75 VLFQMAE 81>NP_006331 Length = 520 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 75 VLFQMAE 81>NP_059345 Length = 552 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 75 VLFQMAE 81>XP_005257005 Length = 522 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 75 VLFQMAE 81>XP_006721701 Length = 529 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 69 VLFQMAE 75>XP_006721700 Length = 535 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 75 VLFQMAE 81>XP_005257002 Length = 553 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 108 VLFQMAE 114>XP_005257001 Length = 554 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 108 VLFQMAE 114>XP_006721699 Length = 554 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 108 VLFQMAE 114>XP_006721698 Length = 555 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 108 VLFQMAE 114>XP_005257000 Length = 567 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 108 VLFQMAE 114>NP_001138360 Length = 534 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 VLFQMSE 8 VLFQM+E Sbjct: 75 VLFQMAE 81>NP_060546 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LFQMSED 9 L+Q+SED Sbjct: 987 LYQLSED 993>NP_001276949 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LFQMSED 9 L+Q+SED Sbjct: 987 LYQLSED 993>NP_001276950 Length = 612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LFQMSED 9 L+Q+SED Sbjct: 512 LYQLSED 518>NP_619579 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVLFQMSED 9 AVLF +S+D Sbjct: 35 AVLFCLSDD 43>NP_068733 Length = 166 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVLFQMSED 9 AVLF +S+D Sbjct: 35 AVLFCLSDD 43>NP_001230574 Length = 149 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVLFQMSED 9 AVLF +S+D Sbjct: 18 AVLFCLSDD 26>NP_001135799 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 183 IIFEMSKD 190>NP_001135798 Length = 672 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 95 IIFEMSKD 102>NP_055866 Length = 406 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VLFQMSED 9 +LF M ED Sbjct: 265 ILFHMKED 272>NP_066968 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 183 IIFEMSKD 190>XP_005252542 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LFQMSED 9 L+Q+SED Sbjct: 679 LYQLSED 685>XP_006717518 Length = 736 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LFQMSED 9 L+Q+SED Sbjct: 679 LYQLSED 685>XP_006717517 Length = 927 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LFQMSED 9 L+Q+SED Sbjct: 870 LYQLSED 876>XP_006717516 Length = 1012 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LFQMSED 9 L+Q+SED Sbjct: 955 LYQLSED 961>XP_006716268 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 183 IIFEMSKD 190>XP_006716267 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 142 IIFEMSKD 149>XP_006716266 Length = 726 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 142 IIFEMSKD 149>XP_005250791 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 183 IIFEMSKD 190>XP_006716265 Length = 760 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 183 IIFEMSKD 190>XP_006716264 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 183 IIFEMSKD 190>XP_006716263 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 183 IIFEMSKD 190>XP_006716262 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 183 IIFEMSKD 190>XP_006716261 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 183 IIFEMSKD 190>XP_006716260 Length = 767 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 VLFQMSED 9 ++F+MS+D Sbjct: 183 IIFEMSKD 190>NP_066008 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 LFQMSED 9 LFQ SED Sbjct: 281 LFQPSED 287>NP_001758 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQMSED 9 FQMS+D Sbjct: 48 FQMSDD 53>NP_005094 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VLFQMSED 9 +LF M ED Sbjct: 366 ILFAMKED 373>XP_005271792 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VLFQMSED 9 +LF M ED Sbjct: 366 ILFAMKED 373>XP_005271791 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VLFQMSED 9 +LF M ED Sbjct: 366 ILFAMKED 373>XP_005271377 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQMSED 9 FQMS+D Sbjct: 48 FQMSDD 53>XP_005271376 Length = 377 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 FQMSED 9 FQMS+D Sbjct: 48 FQMSDD 53Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.130 0.327 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 440,400 Number of extensions: 914 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |