Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005091 19 869 NP_653080 19 869 XP_005267292 19 869 XP_005267291 19 869 XP_005267290 19 869 NP_112599 17 4312 NP_066976 16 5631 NP_001257957 16 5631 XP_006722504 16 5631 XP_006722503 16 5631 NP_775897 16 7355 NP_001159821 16 7355 NP_001159820 16 7355 NP_001159819 16 7355 XP_006721897 16 7355 XP_006721896 16 7355 NP_005426 15 9605 NP_000287 15 9605 NP_001009944 15 9605 NP_002798 15 9605 NP_001177966 15 9605 NP_001003702 15 9605 NP_079032 15 9605 NP_005957 15 9605 NP_113609 15 9605 XP_006726571 15 9605 XP_006726570 15 9605 XP_003960511 15 9605 XP_006726519 15 9605 XP_006723226 15 9605 XP_006722192 15 9605 XP_005255427 15 9605 XP_006720956 15 9605 XP_006720955 15 9605 XP_006720954 15 9605 XP_006720953 15 9605 XP_006720952 15 9605 XP_005270210 15 9605 XP_006718033 15 9605 XP_006717414 15 9605 XP_006716191 15 9605 XP_006716190 15 9605 XP_005246644 15 9605 XP_005246643 15 9605 XP_005246642 15 9605 XP_005246641 15 9605 XP_005246640 15 9605 XP_005246638 15 9605 XP_005246639 15 9605 XP_005246636 15 9605 XP_005246637 15 9605 XP_006712603 15 9605 XP_006710284 15 9605>NP_005091 Length = 1782 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 AVGQA SDI Sbjct: 1622 AVGQAHSDI 1630>NP_653080 Length = 1684 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 AVGQA SDI Sbjct: 1524 AVGQAHSDI 1532>XP_005267292 Length = 1677 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 AVGQA SDI Sbjct: 1517 AVGQAHSDI 1525>XP_005267291 Length = 1684 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 AVGQA SDI Sbjct: 1524 AVGQAHSDI 1532>XP_005267290 Length = 1782 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 AVGQA SDI Sbjct: 1622 AVGQAHSDI 1630>NP_112599 Length = 348 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 A G+ARSD+ Sbjct: 23 AYGRARSDL 31>NP_066976 Length = 772 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 +GQ RSD+ Sbjct: 63 IGQLRSDL 70>NP_001257957 Length = 490 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 +GQ RSD+ Sbjct: 63 IGQLRSDL 70>XP_006722504 Length = 613 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 +GQ RSD+ Sbjct: 63 IGQLRSDL 70>XP_006722503 Length = 772 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 +GQ RSD+ Sbjct: 63 IGQLRSDL 70>NP_775897 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 A+GQARS Sbjct: 7 ALGQARS 13>NP_001159821 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 A+GQARS Sbjct: 7 ALGQARS 13>NP_001159820 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 A+GQARS Sbjct: 7 ALGQARS 13>NP_001159819 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 A+GQARS Sbjct: 7 ALGQARS 13>XP_006721897 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 A+GQARS Sbjct: 7 ALGQARS 13>XP_006721896 Length = 630 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 A+GQARS Sbjct: 7 ALGQARS 13>NP_005426 Length = 1597 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 AVG+ARS Sbjct: 389 AVGRARS 395>NP_000287 Length = 4302 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 VGQ +SD+ Sbjct: 3392 VGQMKSDL 3399>NP_001009944 Length = 4303 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 VGQ +SD+ Sbjct: 3393 VGQMKSDL 3400>NP_002798 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVGQARSDI 9 A+G AR D+ Sbjct: 485 AMGTARQDV 493>NP_001177966 Length = 922 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVGQARSDI 9 A+G AR D+ Sbjct: 485 AMGTARQDV 493>NP_001003702 Length = 484 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 AVG+ARS Sbjct: 389 AVGRARS 395>NP_079032 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VGQARSDI 9 VGQ R D+ Sbjct: 304 VGQLRQDV 311>NP_005957 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>NP_113609 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GQARSDI 9 G+ARSD+ Sbjct: 572 GKARSDL 578>XP_006726571 Length = 3681 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVGQARSDI 9 AVG+ R D+ Sbjct: 707 AVGEDRQDV 715>XP_006726570 Length = 3722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVGQARSDI 9 AVG+ R D+ Sbjct: 707 AVGEDRQDV 715>XP_003960511 Length = 3722 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVGQARSDI 9 AVG+ R D+ Sbjct: 707 AVGEDRQDV 715>XP_006726519 Length = 1493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 AVG+ARS Sbjct: 370 AVGRARS 376>XP_006723226 Length = 403 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 AVGQAR 6 AVGQAR Sbjct: 316 AVGQAR 321>XP_006722192 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 GQARSDI 9 G+ARSD+ Sbjct: 409 GKARSDL 415>XP_005255427 Length = 3288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 VGQ +SD+ Sbjct: 2378 VGQMKSDL 2385>XP_006720956 Length = 3895 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 VGQ +SD+ Sbjct: 2985 VGQMKSDL 2992>XP_006720955 Length = 4279 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 VGQ +SD+ Sbjct: 3369 VGQMKSDL 3376>XP_006720954 Length = 4334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 VGQ +SD+ Sbjct: 3424 VGQMKSDL 3431>XP_006720953 Length = 4339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 VGQ +SD+ Sbjct: 3429 VGQMKSDL 3436>XP_006720952 Length = 4340 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 VGQARSDI 9 VGQ +SD+ Sbjct: 3430 VGQMKSDL 3437>XP_005270210 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VGQARSDI 9 VGQ R D+ Sbjct: 243 VGQLRQDV 250>XP_006718033 Length = 888 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 VGQARSDI 9 VGQ R D+ Sbjct: 243 VGQLRQDV 250>XP_006717414 Length = 5100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVGQARSDI 9 AVG+ R D+ Sbjct: 2085 AVGEDRQDV 2093>XP_006716191 Length = 1543 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 AVG+ARS Sbjct: 389 AVGRARS 395>XP_006716190 Length = 1597 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVGQARS 7 AVG+ARS Sbjct: 389 AVGRARS 395>XP_005246644 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>XP_005246643 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>XP_005246642 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>XP_005246641 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>XP_005246640 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>XP_005246638 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>XP_005246639 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>XP_005246636 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>XP_005246637 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>XP_006712603 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 AVGQARSDI 9 ++GQ +SD+ Sbjct: 138 SLGQGKSDV 146>XP_006710284 Length = 945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 AVGQARSDI 9 AVG+ R D+ Sbjct: 711 AVGEDRQDV 719Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.315 0.127 0.324 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 411,552 Number of extensions: 521 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |