Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001121619 18 1135 NP_000258 18 1135 NP_001035957 18 1135 XP_006721991 18 1135 XP_006721990 18 1135 XP_006721989 18 1135 XP_005258041 18 1135 XP_006721988 18 1135 XP_006721987 18 1135 XP_006721986 18 1135 XP_005258040 18 1135 XP_006721985 18 1135 NP_001153392 17 4312 NP_001001668 16 5631 XP_005258968 16 5631 XP_005258967 16 5631 XP_006723273 16 5631 NP_008900 16 7355 NP_001265381 16 7355 NP_001265380 16 7355 NP_001265382 16 7355 NP_009168 16 7355 NP_001005176 16 7355 XP_006723523 16 7355 XP_006723522 16 7355 XP_006723420 16 7355 XP_006723419 16 7355 XP_006723418 16 7355 XP_006723417 16 7355 XP_005246315 16 7355 XP_006712289 16 7355 XP_005246314 16 7355 XP_005246313 16 7355 XP_005246312 16 7355 XP_005246311 16 7355 XP_005246310 16 7355 XP_006712288 16 7355 XP_006712287 16 7355 XP_005246309 16 7355 XP_006712286 16 7355 NP_001008801 16 7355 NP_002011 15 9605 NP_891555 15 9605 NP_001827 15 9605 NP_073590 15 9605 NP_001243050 15 9605 NP_002431 15 9605 XP_006710883 15 9605 XP_006710882 15 9605 XP_006710881 15 9605>NP_001121619 Length = 593 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>NP_000258 Length = 2818 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>NP_001035957 Length = 2839 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>XP_006721991 Length = 1632 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>XP_006721990 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>XP_006721989 Length = 2823 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>XP_005258041 Length = 2836 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>XP_006721988 Length = 2846 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>XP_006721987 Length = 2849 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>XP_006721986 Length = 2854 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 139 AVFSRIST 146>XP_005258040 Length = 2857 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>XP_006721985 Length = 2867 Score = 18.5 bits (36), Expect = 1135 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 AVFSRIST 8 AVFSRIST Sbjct: 152 AVFSRIST 159>NP_001153392 Length = 687 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 AVFSRIS 7 AVFSRIS Sbjct: 664 AVFSRIS 670>NP_001001668 Length = 717 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 +FS+IST+ Sbjct: 236 IFSKISTL 243>XP_005258968 Length = 624 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 +FS+IST+ Sbjct: 236 IFSKISTL 243>XP_005258967 Length = 666 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 +FS+IST+ Sbjct: 185 IFSKISTL 192>XP_006723273 Length = 717 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 +FS+IST+ Sbjct: 236 IFSKISTL 243>NP_008900 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 VF+R+ST+ Sbjct: 363 VFNRLSTL 370>NP_001265381 Length = 807 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>NP_001265380 Length = 840 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>NP_001265382 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>NP_009168 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>NP_001005176 Length = 172 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>XP_006723523 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 VF+R+ST+ Sbjct: 310 VFNRLSTL 317>XP_006723522 Length = 541 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 VF+R+ST+ Sbjct: 382 VFNRLSTL 389>XP_006723420 Length = 606 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 VF+R+ST+ Sbjct: 251 VFNRLSTL 258>XP_006723419 Length = 634 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 VF+R+ST+ Sbjct: 363 VFNRLSTL 370>XP_006723418 Length = 662 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 VF+R+ST+ Sbjct: 363 VFNRLSTL 370>XP_006723417 Length = 704 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 VF+R+ST+ Sbjct: 349 VFNRLSTL 356>XP_005246315 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>XP_006712289 Length = 750 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>XP_005246314 Length = 789 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>XP_005246313 Length = 806 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>XP_005246312 Length = 817 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>XP_005246311 Length = 833 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>XP_005246310 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>XP_006712288 Length = 845 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>XP_006712287 Length = 847 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 93 ALFSRINLM 101>XP_005246309 Length = 864 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>XP_006712286 Length = 867 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 AVFSRISTM 9 A+FSRI+ M Sbjct: 113 ALFSRINLM 121>NP_001008801 Length = 522 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 VFSRISTM 9 VF+R+ST+ Sbjct: 363 VFNRLSTL 370>NP_002011 Length = 1298 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FSRISTM 9 FS++STM Sbjct: 1199 FSQVSTM 1205>NP_891555 Length = 1363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 FSRISTM 9 FS++STM Sbjct: 1199 FSQVSTM 1205>NP_001827 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVFSRIS 7 AVF+RIS Sbjct: 228 AVFTRIS 234>NP_073590 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVFSRIS 7 +VFSRIS Sbjct: 236 SVFSRIS 242>NP_001243050 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVFSRIS 7 +VFSRIS Sbjct: 236 SVFSRIS 242>NP_002431 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 VFSRIST 8 +F+RIST Sbjct: 719 IFTRIST 725>XP_006710883 Length = 342 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVFSRIS 7 +VFSRIS Sbjct: 236 SVFSRIS 242>XP_006710882 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVFSRIS 7 +VFSRIS Sbjct: 236 SVFSRIS 242>XP_006710881 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 AVFSRIS 7 +VFSRIS Sbjct: 236 SVFSRIS 242Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.337 0.129 0.317 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 311,309 Number of extensions: 814 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |